ATTED-II : GeneID search result

[←][→] ath AT5G47670 Gene

functional annotation

Function

nuclear factor Y, subunit B6

GO BP

GO:0009738 [list] [network] abscisic acid-activated signaling pathway	(194 genes)	IMP
GO:0045893 [list] [network] positive regulation of transcription, DNA-templated	(495 genes)	IBA IDA
GO:0006355 [list] [network] regulation of transcription, DNA-templated	(1984 genes)	TAS

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

IEA ISM

GO MF

GO:0033613 [list] [network] activating transcription factor binding	(8 genes)	IPI
GO:0046982 [list] [network] protein heterodimerization activity	(122 genes)	IEA
GO:0043565 [list] [network] sequence-specific DNA binding	(796 genes)	IEA
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1599 genes)	ISS
GO:0005515 [list] [network] protein binding	(4605 genes)	IPI

KEGG

Protein

NP_001078727.1 NP_001318754.1 NP_199578.2

BLAST

NP_001078727.1 NP_001318754.1 NP_199578.2

Orthologous

[Ortholog page] LOC547959 (gma) LEC1 (ath) LOC7458472 (ppo) LOC7474076 (ppo) LOC11429280 (mtr) LOC25494322 (mtr) LEC1-A (gma) LEC1-B (gma) LOC100811633 (gma) LOC100855401 (vvi) LOC101246718 (sly) LOC101252139 (sly) LOC101253433 (sly) LOC101256476 (sly) LOC103654015 (zma) LOC103827627 (bra) LOC103829359 (bra) LOC103839510 (bra) LOC103869085 (bra) LOC112940645 (sly)

Subcellular
localization
wolf

nucl 5, chlo 1, pero 1, cyto 1, plas 1, vacu 1, chlo_mito 1, cyto_plas 1	(predict for NP_001078727.1)
pero 5, nucl 3, cyto_pero 3	(predict for NP_001318754.1)
pero 5, nucl 3, cyto_pero 3	(predict for NP_199578.2)

Subcellular
localization
TargetP

other 8, chlo 3	(predict for NP_001078727.1)
mito 4	(predict for NP_001318754.1)
mito 4	(predict for NP_199578.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with NF-YB6 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.9	AT5G22810	GDSL-like lipase/acylhydrolase superfamily protein	[detail]	832344
4.8	CSY1	citrate synthase 1	[detail]	825043
4.6	MYB118	myb domain protein 118	[detail]	822399

Coexpressed
gene list

[Coexpressed gene list for NF-YB6]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

248754_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

248754_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

248754_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	834818
Refseq ID (protein)	NP_001078727.1
	NP_001318754.1
	NP_199578.2

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