[←][→] ath   At5g48220 Gene
functional annotation
Function   Aldolase-type TIM barrel family protein      
GO BP
GO CC
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
KEGG ath00400 [list] [network] Phenylalanine, tyrosine and tryptophan biosynthesis (56 genes)
ath01230 [list] [network] Biosynthesis of amino acids (244 genes)
Protein NP_001078734.1  NP_001190488.1  NP_001318761.1  NP_199633.1 
BLAST NP_001078734.1  NP_001190488.1  NP_001318761.1  NP_199633.1 
Orthologous [Ortholog page] AT2G04400 (ath)  LOC4336102 (osa)  LOC7469338 (ppo)  LOC11429687 (mtr)  LOC100788172 (gma)  LOC100790882 (gma)  LOC101250390 (sly)  LOC103860298 (bra)  LOC103874936 (bra)  LOC123045713 (tae)  LOC123053586 (tae)  LOC123189465 (tae)  LOC123426964 (hvu) 
Subcellular
localization
wolf
cyto 9,  chlo 1,  E.R. 1  (predict for NP_001078734.1)
cyto 6,  chlo 3,  cyto_nucl 3,  cyto_pero 3,  cyto_E.R. 3  (predict for NP_001190488.1)
cyto 9,  chlo 1,  E.R. 1  (predict for NP_001318761.1)
chlo 6,  chlo_mito 5,  mito 4  (predict for NP_199633.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for NP_001078734.1)
scret 7  (predict for NP_001190488.1)
other 7,  mito 3  (predict for NP_001318761.1)
chlo 6,  mito 5  (predict for NP_199633.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00450 Selenocompound metabolism 2
Genes directly connected with AT5G48220 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.1 ABCB29 ABC2 homolog 12 [detail] 830269
7.7 PDE338 Nucleic acid-binding proteins superfamily [detail] 843502
7.3 AT1G01970 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 839299
5.5 AT1G53120 RNA-binding S4 domain-containing protein [detail] 841746
Coexpressed
gene list		 [Coexpressed gene list for AT5G48220]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248688_at
248688_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248688_at
248688_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248688_at
248688_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834875      
Refseq ID (protein) NP_001078734.1 
NP_001190488.1 
NP_001318761.1 
NP_199633.1 


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