[←][→] ath   AT5G48220 Gene
functional annotation
Function   Aldolase-type TIM barrel family protein  
GO BP
GO CC
GO:0009534 [list] [network] chloroplast thylakoid  (474 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
KEGG ath00400 [list] [network] Phenylalanine, tyrosine and tryptophan biosynthesis (56 genes)
ath01230 [list] [network] Biosynthesis of amino acids (251 genes)
Protein NP_001078734.1  NP_001190488.1  NP_001318761.1  NP_199633.1 
BLAST NP_001078734.1  NP_001190488.1  NP_001318761.1  NP_199633.1 
Orthologous [Ortholog page] LOC4336102 (osa)  LOC7469338 (ppo)  LOC11429687 (mtr)  LOC100251045 (vvi)  LOC100274566 (zma)  LOC100788172 (gma)  LOC100790882 (gma)  LOC101250390 (sly)  LOC103874936 (bra) 
Subcellular
localization
wolf
cyto 9,  chlo 1,  E.R. 1  (predict for NP_001078734.1)
cyto 6,  chlo 3,  cyto_nucl 3,  cyto_pero 3,  cyto_E.R. 3  (predict for NP_001190488.1)
cyto 9,  chlo 1,  E.R. 1  (predict for NP_001318761.1)
chlo 6,  chlo_mito 5,  mito 4  (predict for NP_199633.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for NP_001078734.1)
scret 7  (predict for NP_001190488.1)
other 7,  mito 3  (predict for NP_001318761.1)
chlo 6,  mito 5  (predict for NP_199633.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
Genes directly connected with AT5G48220 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.8 YLMG2 YGGT family protein [detail] 832252
7.6 PPD5 PsbP domain protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein) [detail] 831016
7.5 ABCB29 ABC2 homolog 12 [detail] 830269
7.4 PDE338 Nucleic acid-binding proteins superfamily [detail] 843502
6.8 PDE149 integral membrane TerC family protein [detail] 831086
5.5 AT1G53120 RNA-binding S4 domain-containing protein [detail] 841746
Coexpressed
gene list		 [Coexpressed gene list for AT5G48220]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248688_at
248688_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248688_at
248688_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248688_at
248688_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834875      
Refseq ID (protein) NP_001078734.1 
NP_001190488.1 
NP_001318761.1 
NP_199633.1 


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