[←][→] ath   At5g48640 Gene
functional annotation
Function   Cyclin family protein  
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_001330772.1  NP_001330773.1  NP_001330774.1  NP_001330775.1  NP_199675.2 
BLAST NP_001330772.1  NP_001330773.1  NP_001330774.1  NP_001330775.1  NP_199675.2 
Orthologous [Ortholog page] AT5G48630 (ath)  LOC7471166 (ppo)  LOC9272663 (osa)  LOC11435941 (mtr)  LOC100784345 (gma)  LOC100816019 (gma)  LOC101252599 (sly)  LOC103854550 (bra)  LOC103874972 (bra)  LOC123104285 (tae)  LOC123112545 (tae)  LOC123122041 (tae)  LOC123128708 (tae)  LOC123138915 (tae)  LOC123145834 (tae)  LOC123399710 (hvu)  LOC123406332 (hvu) 
Subcellular
localization
wolf
chlo_mito 4,  chlo 3,  mito 3,  cyto 2,  nucl 1,  golg 1  (predict for NP_001330772.1)
chlo_mito 4,  chlo 3,  mito 3,  cyto 2,  nucl 1,  golg 1  (predict for NP_001330773.1)
mito 7,  chlo 3  (predict for NP_001330774.1)
chlo_mito 4,  chlo 3,  mito 3,  cyto 2,  nucl 1,  golg 1  (predict for NP_001330775.1)
cyto 6,  mito 1,  chlo 1,  E.R. 1,  cysk 1,  cyto_mito 1,  mito_plas 1  (predict for NP_199675.2)
Subcellular
localization
TargetP
scret 4,  mito 4  (predict for NP_001330772.1)
scret 4,  mito 4  (predict for NP_001330773.1)
mito 8  (predict for NP_001330774.1)
scret 4,  mito 4  (predict for NP_001330775.1)
other 9  (predict for NP_199675.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
Genes directly connected with AT5G48640 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.8 AT5G06265 hyaluronan mediated motility receptor-like protein [detail] 830514
5.7 AT3G20870 ZIP metal ion transporter family [detail] 821636
5.7 AT5G18940 Mo25 family protein [detail] 832012
5.3 ING2 PHD finger protein-like protein [detail] 841881
5.3 AT4G04880 adenosine/AMP deaminase family protein [detail] 825826
5.0 AT1G13910 Leucine-rich repeat (LRR) family protein [detail] 837950
Coexpressed
gene list		 [Coexpressed gene list for AT5G48640]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248659_at
248659_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248659_at
248659_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248659_at
248659_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834921      
Refseq ID (protein) NP_001330772.1 
NP_001330773.1 
NP_001330774.1 
NP_001330775.1 
NP_199675.2 


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