[←][→] ath   At5g48790 Gene
functional annotation
Function   LOW PSII ACCUMULATION protein (DUF1995)    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009642 [list] [network] response to light intensity  (373 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO MF
KEGG
Protein NP_001332148.1  NP_001332149.1  NP_568702.1 
BLAST NP_001332148.1  NP_001332149.1  NP_568702.1 
Orthologous [Ortholog page] LOC4328182 (osa)  LOC7491892 (ppo)  LOC11411101 (mtr)  LOC100805878 (gma)  LOC101261055 (sly)  LOC103874988 (bra)  LOC123131993 (tae)  LOC123136043 (tae)  LOC123143528 (tae) 
Subcellular
localization
wolf
chlo 9  (predict for NP_001332148.1)
chlo 9  (predict for NP_001332149.1)
chlo 9  (predict for NP_568702.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001332148.1)
chlo 9  (predict for NP_001332149.1)
chlo 9  (predict for NP_568702.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00710 Carbon fixation in photosynthetic organisms 2
ath01200 Carbon metabolism 2
Genes directly connected with AT5G48790 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.6 AT5G44520 NagB/RpiA/CoA transferase-like superfamily protein [detail] 834479
7.0 AT1G76450 Photosystem II reaction center PsbP family protein [detail] 843978
7.0 AT3G61080 Protein kinase superfamily protein [detail] 825280
Coexpressed
gene list		 [Coexpressed gene list for AT5G48790]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248624_at
248624_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248624_at
248624_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248624_at
248624_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834937      
Refseq ID (protein) NP_001332148.1 
NP_001332149.1 
NP_568702.1 


The preparation time of this page was 0.2 [sec].