| functional annotation |
| Function |
Tetratricopeptide repeat (TPR)-like superfamily protein |
|
| GO BP |
|
GO:0006792 [list] [network] regulation of sulfur utilization
|
(1 genes)
|
IMP
|
 |
|
GO:0010438 [list] [network] cellular response to sulfur starvation
|
(9 genes)
|
IEP
|
|
|
GO:0010439 [list] [network] regulation of glucosinolate biosynthetic process
|
(12 genes)
|
IGI
|
|
|
| GO CC |
|
GO:0090568 [list] [network] nuclear transcriptional repressor complex
|
(8 genes)
|
IDA
|
|
|
GO:0005634 [list] [network] nucleus
|
(10793 genes)
|
ISM
|
|
|
| GO MF |
|
| KEGG |
|
|
| Protein |
NP_199696.2
|
| BLAST |
NP_199696.2
|
| Orthologous |
[Ortholog page]
AT1G04770 (ath)
LOC4339251 (osa)
LOC7478283 (ppo)
LOC11409859 (mtr)
LOC11426232 (mtr)
LOC100244941 (vvi)
LOC100252818 (vvi)
LOC100254562 (vvi)
LOC100263213 (vvi)
LOC100274072 (zma)
LOC100788004 (gma)
LOC100788542 (gma)
LOC100805188 (gma)
LOC100805731 (gma)
LOC101258461 (sly)
LOC101258787 (sly)
LOC101260472 (sly)
LOC103836554 (bra)
LOC103837267 (bra)
LOC103844223 (bra)
LOC103854562 (bra)
LOC103874994 (bra)
|
Subcellular
localization
wolf |
|
nucl 6,
chlo 1,
mito 1,
cyto_mito 1
|
(predict for NP_199696.2)
|
|
Subcellular
localization
TargetP |
|
other 9
|
(predict for NP_199696.2)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath00270 |
Cysteine and methionine metabolism |
2 |
 |
| ath01200 |
Carbon metabolism |
2 |
 |
| ath01230 |
Biosynthesis of amino acids |
2 |
 |
| ath00260 |
Glycine, serine and threonine metabolism |
2 |
 |
| ath00460 |
Cyanoamino acid metabolism |
2 |
 |
Genes directly connected with ATSDI1 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 20.3 |
LSU1 |
response to low sulfur 1 |
[detail] |
824120 |
| 18.8 |
LSU3 |
response to low sulfur 3 |
[detail] |
824119 |
| 18.4 |
SHM7 |
serine hydroxymethyltransferase 7 |
[detail] |
840543 |
| 18.3 |
AT1G04770 |
Tetratricopeptide repeat (TPR)-like superfamily protein |
[detail] |
839418 |
| 16.7 |
AT5G26220 |
ChaC-like family protein |
[detail] |
832691 |
| 13.4 |
SERAT3;2 |
serine acetyltransferase 3;2 |
[detail] |
829716 |
| 13.4 |
SULTR4;2 |
sulfate transporter 4;2 |
[detail] |
820431 |
| 13.2 |
LSU2 |
response to low sulfur 2 |
[detail] |
832538 |
| 12.2 |
MSRB5 |
methionine sulfoxide reductase B5 |
[detail] |
825820 |
| 10.5 |
BGLU28 |
beta glucosidase 28 |
[detail] |
819053 |
| 10.3 |
AT3G56200 |
Transmembrane amino acid transporter family protein |
[detail] |
824786 |
| 8.6 |
PYD4 |
PYRIMIDINE 4 |
[detail] |
820034 |
| 8.0 |
AT4G20820 |
FAD-binding Berberine family protein |
[detail] |
827830 |
| 7.6 |
AT1G12030 |
phosphoenolpyruvate carboxylase, putative (DUF506) |
[detail] |
837755 |
| 7.6 |
AT5G40670 |
PQ-loop repeat family protein / transmembrane family protein |
[detail] |
834067 |
| 7.4 |
SULTR1;2 |
sulfate transporter 1;2 |
[detail] |
844135 |
| 7.1 |
AT4G31330 |
transmembrane protein, putative (Protein of unknown function, DUF599) |
[detail] |
829260 |
| 6.6 |
SIP1;2 |
Aquaporin-like superfamily protein |
[detail] |
831947 |
| 6.3 |
AT3G19000 |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
[detail] |
821433 |
| 5.3 |
AST56 |
STAS domain / Sulfate transporter family |
[detail] |
844134 |
| 4.8 |
AT2G32487 |
hypothetical protein |
[detail] |
5007918 |
| 4.7 |
GSTU27 |
glutathione S-transferase tau 27 |
[detail] |
823491 |
|
Coexpressed
gene list |
[Coexpressed gene list for ATSDI1]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
248676_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
248676_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
248676_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT5G48850 Gene
