ATTED-II : GeneID search result

[←][→] ath AT5G48880 Gene

functional annotation

Function

peroxisomal 3-keto-acyl-CoA thiolase 2

GO BP

GO:0010124 [list] [network] phenylacetate catabolic process	(3 genes)	IBA
GO:0031408 [list] [network] oxylipin biosynthetic process	(23 genes)	IEA
GO:0006635 [list] [network] fatty acid beta-oxidation	(35 genes)	IBA
GO:0019395 [list] [network] fatty acid oxidation	(39 genes)	TAS

GO CC

GO:0005777 [list] [network] peroxisome	(325 genes)	IBA IDA
GO:0009507 [list] [network] chloroplast	(5095 genes)	ISM
GO:0005737 [list] [network] cytoplasm	(14855 genes)	ISM

GO MF

GO:0003988 [list] [network] acetyl-CoA C-acyltransferase activity

(6 genes)

IBA

KEGG

ath00071 [list] [network] Fatty acid degradation (47 genes)

ath00280 [list] [network] Valine, leucine and isoleucine degradation (51 genes)

ath00592 [list] [network] alpha-Linolenic acid metabolism (44 genes)

ath01040 [list] [network] Biosynthesis of unsaturated fatty acids (24 genes)

ath01212 [list] [network] Fatty acid metabolism (69 genes)

ath04146 [list] [network] Peroxisome (87 genes)

Protein

NP_001032037.1 NP_001331840.1 NP_568704.2 NP_851157.1

BLAST

NP_001032037.1 NP_001331840.1 NP_568704.2 NP_851157.1

Orthologous

[Ortholog page] LOC547735 (gma) PKT3 (ath) PKT4 (ath) LOC4331150 (osa) LOC4348804 (osa) LOC7460522 (ppo) LOC7481465 (ppo) LOC11417930 (mtr) LOC25483109 (mtr) LOC100170734 (gma) LOC100192501 (zma) LOC100245940 (vvi) LOC100247651 (vvi) LOC100274263 (zma) LOC100789930 (gma) LOC100807194 (gma) ACAT5 (sly) ACAT4 (sly) LOC103836556 (bra) LOC103854565 (bra) LOC103857473 (bra) LOC103865244 (bra) LOC103867566 (bra)

Subcellular
localization
wolf

cyto 6, cysk 1, cysk_nucl 1, chlo 1, mito 1, pero 1, chlo_mito 1	(predict for NP_001032037.1)
cyto 6, cysk 1, cysk_nucl 1, chlo 1, mito 1, pero 1, chlo_mito 1	(predict for NP_001331840.1)
cyto 6, cysk 1, cysk_nucl 1, chlo 1, mito 1, pero 1, chlo_mito 1	(predict for NP_568704.2)
cyto 7, pero 3	(predict for NP_851157.1)

Subcellular
localization
TargetP

mito 4	(predict for NP_001032037.1)
mito 4	(predict for NP_001331840.1)
mito 4	(predict for NP_568704.2)
other 7, scret 3	(predict for NP_851157.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00941	Flavonoid biosynthesis	6
ath00940	Phenylpropanoid biosynthesis	2
ath00944	Flavone and flavonol biosynthesis	2

Genes directly connected with KAT5 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
9.5	4CL3	4-coumarate:CoA ligase 3	[detail]	842814
9.4	CHIL	Chalcone-flavanone isomerase family protein	[detail]	830409
9.1	TT4	Chalcone and stilbene synthase family protein	[detail]	831241
5.2	CINV2	cytosolic invertase 2	[detail]	826535
4.1	AT4G27560	UDP-Glycosyltransferase superfamily protein	[detail]	828865

Coexpressed
gene list

[Coexpressed gene list for KAT5]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

248625_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

248625_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

248625_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	834946
Refseq ID (protein)	NP_001032037.1
	NP_001331840.1
	NP_568704.2
	NP_851157.1

The preparation time of this page was 0.2 [sec].