[←][→] ath   At5g48910 Gene
functional annotation
Function   Pentatricopeptide repeat (PPR) superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009451 [list] [network] RNA modification  (197 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  IDA ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (429 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG
Protein NP_199702.1 
BLAST NP_199702.1 
Orthologous [Ortholog page] LOC7455688 (ppo)  LOC100812343 (gma)  LOC103875002 (bra)  LOC103875038 (bra)  DUA1 (osa)  LOC123104060 (tae)  LOC123121806 (tae)  LOC123399057 (hvu) 
Subcellular
localization
wolf
chlo 3,  mito 3,  pero 3,  chlo_mito 3  (predict for NP_199702.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_199702.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with LPA66 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.7 CRR21 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 835668
6.8 AT3G22150 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 821779
6.8 AT1G29530 uncharacterized protein [detail] 839830
Coexpressed
gene list		 [Coexpressed gene list for LPA66]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248640_at
248640_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248640_at
248640_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248640_at
248640_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834949      
Refseq ID (protein) NP_199702.1 


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