ATTED-II : GeneID search result

[←][→] ath At5g49280 Gene

functional annotation

Function

hydroxyproline-rich glycoprotein family protein

GO BP

GO:0010200 [list] [network] response to chitin	(304 genes)	IEA
GO:0006520 [list] [network] amino acid metabolic process	(418 genes)	IEA
GO:0046394 [list] [network] carboxylic acid biosynthetic process	(517 genes)	IEA
GO:0009611 [list] [network] response to wounding	(816 genes)	IEA
GO:0098542 [list] [network] defense response to other organism	(2060 genes)	IEA
GO:0010035 [list] [network] response to inorganic substance	(2100 genes)	IEA

GO CC

GO:0016020 [list] [network] membrane

(3629 genes)

TAS

GO MF

KEGG

Protein

NP_568708.1

BLAST

NP_568708.1

Orthologous

[Ortholog page] AT3G06750 (ath) LOC103837280 (bra) LOC103854585 (bra) LOC103859177 (bra) LOC103870723 (bra) LOC103875031 (bra) LOC104649338 (sly) LOC106798271 (gma)

Subcellular
localization
wolf

chlo 3, extr 2, vacu 2, plas 1, chlo_mito 1

(predict for NP_568708.1)

Subcellular
localization
TargetP

scret 7

(predict for NP_568708.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT5G49280 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
6.0	AT1G17620	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[detail]	838339
5.5	AGP10	arabinogalactan protein 10	[detail]	826482
4.9	GATL2	galacturonosyltransferase-like 2	[detail]	824240
4.8	AT5G23850	O-glucosyltransferase rumi-like protein (DUF821)	[detail]	832450

Coexpressed
gene list

[Coexpressed gene list for AT5G49280]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

248592_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

248592_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

248592_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	834988
Refseq ID (protein)	NP_568708.1

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