[←][→] ath   At5g49500 Gene
functional annotation
Function   Signal recognition particle, SRP54 subunit protein      
GO BP
GO:0006614 [list] [network] SRP-dependent cotranslational protein targeting to membrane  (7 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath03060 [list] [network] Protein export (54 genes)
Protein NP_001332231.1  NP_199761.1 
BLAST NP_001332231.1  NP_199761.1 
Orthologous [Ortholog page] LOC544156 (sly)  ATHSRP54A (ath)  AT1G48900 (ath)  LOC4324712 (osa)  LOC4339274 (osa)  LOC7467986 (ppo)  LOC7487461 (ppo)  LOC11419634 (mtr)  LOC11420996 (mtr)  LOC100789217 (gma)  LOC100792778 (gma)  LOC100811698 (gma)  LOC100815799 (gma)  SRP54 (sly)  LOC103832974 (bra)  LOC103871438 (bra)  LOC103872323 (bra)  LOC112324274 (ppo)  LOC123062012 (tae)  LOC123139386 (tae)  LOC123182564 (tae)  LOC123182565 (tae)  LOC123424800 (hvu)  LOC123447637 (hvu)  LOC123447662 (hvu) 
Subcellular
localization
wolf
chlo 4,  mito 3,  nucl 1,  cyto 1,  cyto_nucl 1,  cyto_mito 1,  mito_plas 1  (predict for NP_001332231.1)
cyto 9,  chlo 1,  nucl 1  (predict for NP_199761.1)
Subcellular
localization
TargetP
mito 7,  other 4  (predict for NP_001332231.1)
other 7  (predict for NP_199761.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
ath04130 SNARE interactions in vesicular transport 2
Genes directly connected with AT5G49500 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.4 VDAC5 voltage dependent anion channel 5 [detail] 824154
5.0 SYP41 syntaxin of plants 41 [detail] 832756
5.0 AT5G50330 Protein kinase superfamily protein [detail] 835099
Coexpressed
gene list		 [Coexpressed gene list for AT5G49500]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248610_at
248610_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248610_at
248610_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248610_at
248610_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835010      
Refseq ID (protein) NP_001332231.1 
NP_199761.1 


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