[←][→] ath   At5g50280 Gene
functional annotation
Function   Pentatricopeptide repeat (PPR) superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  NAS  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  IDA ISM  
GO MF
KEGG
Protein NP_199839.1 
BLAST NP_199839.1 
Orthologous [Ortholog page] LOC4338318 (osa)  LOC7484442 (ppo)  LOC11432071 (mtr)  LOC100775643 (gma)  LOC100788628 (gma)  LOC100810527 (gma)  LOC101255679 (sly)  LOC103858442 (bra)  LOC123045257 (tae)  LOC123053090 (tae)  LOC123188998 (tae)  LOC123426476 (hvu) 
Subcellular
localization
wolf
chlo 8,  nucl 1,  mito 1,  plas 1,  nucl_plas 1,  mito_plas 1  (predict for NP_199839.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_199839.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with EMB1006 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.3 AT5G14460 Pseudouridine synthase family protein [detail] 831297
8.3 AT5G39980 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 833995
8.2 AT4G30825 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 829206
8.0 AT3G14330 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 820653
6.8 EMB175 Pentatricopeptide repeat (PPR) superfamily protein [detail] 831717
Coexpressed
gene list		 [Coexpressed gene list for EMB1006]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248547_at
248547_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248547_at
248547_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248547_at
248547_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835093      
Refseq ID (protein) NP_199839.1 


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