[←][→] ath   AT5G50340 Gene
functional annotation
Function   DNA repair protein RadA-like protein  
GO BP
GO:0006281 [list] [network] DNA repair  (295 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0003684 [list] [network] damaged DNA binding  (40 genes)  IEA  
GO:0008094 [list] [network] DNA-dependent ATPase activity  (82 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG
Protein NP_001318773.1  NP_001332610.1  NP_199845.3 
BLAST NP_001318773.1  NP_001332610.1  NP_199845.3 
Orthologous [Ortholog page] LOC4340150 (osa)  LOC7475108 (ppo)  LOC11424963 (mtr)  LOC11427154 (mtr)  LOC100258398 (vvi)  LOC100384790 (zma)  LOC100791181 (gma)  LOC100794165 (gma)  LOC101253170 (sly)  LOC103858447 (bra)  LOC104880300 (vvi) 
Subcellular
localization
wolf
cyto 5,  nucl 3,  cyto_E.R. 3  (predict for NP_001318773.1)
cyto 5,  nucl 3,  cyto_E.R. 3  (predict for NP_001332610.1)
chlo 9,  chlo_mito 6  (predict for NP_199845.3)
Subcellular
localization
TargetP
other 6  (predict for NP_001318773.1)
other 6  (predict for NP_001332610.1)
mito 7  (predict for NP_199845.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 3
ath03018 RNA degradation 2
Genes directly connected with AT5G50340 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.8 AT5G50350 hypothetical protein [detail] 835102
5.0 AT3G17340 ARM repeat superfamily protein [detail] 820997
5.0 AT3G58560 DNAse I-like superfamily protein [detail] 825025
Coexpressed
gene list		 [Coexpressed gene list for AT5G50340]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248555_at
248555_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248555_at
248555_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248555_at
248555_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835101      
Refseq ID (protein) NP_001318773.1 
NP_001332610.1 
NP_199845.3 


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