[←][→] ath   At5g50340 Gene
functional annotation
Function   DNA repair protein RadA-like protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006281 [list] [network] DNA repair  (203 genes)  IEA  
GO:0051301 [list] [network] cell division  (442 genes)  IEA  
GO:0048523 [list] [network] negative regulation of cellular process  (960 genes)  IEA  
GO:0030154 [list] [network] cell differentiation  (1176 genes)  IEA  
GO:0048316 [list] [network] seed development  (1294 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
GO:0003684 [list] [network] damaged DNA binding  (9 genes)  IEA  
GO:0140664 [list] [network] ATP-dependent DNA damage sensor activity  (11 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (253 genes)  IEA  
KEGG
Protein NP_001318773.1  NP_001332610.1  NP_199845.3 
BLAST NP_001318773.1  NP_001332610.1  NP_199845.3 
Orthologous [Ortholog page] LOC4340150 (osa)  LOC11424963 (mtr)  LOC11427154 (mtr)  LOC100791181 (gma)  LOC100794165 (gma)  LOC101253170 (sly)  LOC103858447 (bra)  LOC112326032 (ppo)  LOC123150213 (tae)  LOC123155615 (tae)  LOC123167654 (tae)  LOC123408137 (hvu) 
Subcellular
localization
wolf
cyto 5,  nucl 3,  cyto_E.R. 3  (predict for NP_001318773.1)
cyto 5,  nucl 3,  cyto_E.R. 3  (predict for NP_001332610.1)
chlo 9,  chlo_mito 6  (predict for NP_199845.3)
Subcellular
localization
TargetP
other 6  (predict for NP_001318773.1)
other 6  (predict for NP_001332610.1)
mito 7  (predict for NP_199845.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
ath03030 DNA replication 2
Genes directly connected with AT5G50340 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.6 AT3G58560 DNAse I-like superfamily protein [detail] 825025
5.3 AT3G17340 ARM repeat superfamily protein [detail] 820997
5.0 AT5G36210 alpha/beta-Hydrolases superfamily protein [detail] 833618
Coexpressed
gene list		 [Coexpressed gene list for AT5G50340]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248555_at
248555_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248555_at
248555_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248555_at
248555_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835101      
Refseq ID (protein) NP_001318773.1 
NP_001332610.1 
NP_199845.3 


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