[][] ath   AT5G50920 Gene
functional annotation
Function   CLPC homologue 1
GO BP
GO:0010380 [list] [network] regulation of chlorophyll biosynthetic process  (19 genes)  IMP  
GO:0045037 [list] [network] protein import into chloroplast stroma  (25 genes)  IMP  
GO:0045036 [list] [network] protein targeting to chloroplast  (46 genes)  IMP  
GO:0009658 [list] [network] chloroplast organization  (194 genes)  IMP  
GO CC
GO:0031897 [list] [network] Tic complex  (3 genes)  TAS  
GO:0009706 [list] [network] chloroplast inner membrane  (80 genes)  IDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (373 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0005618 [list] [network] cell wall  (685 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0009532 [list] [network] plastid stroma  (757 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  RCA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  HDA IDA ISM  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA IDA  
GO MF
GO:0004176 [list] [network] ATP-dependent peptidase activity  (30 genes)  IDA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_568746.1 
BLAST NP_568746.1 
Orthologous [Ortholog page] HSP93-III (ath)LOC4335702 (osa)LOC4350258 (osa)LOC4351828 (osa)LOC7456642 (ppo)LOC11438455 (mtr)LOC25489942 (mtr)LOC25491143 (mtr)LOC100250896 (vvi)LOC100383416 (zma)LOC100502219 (zma)LOC100795228 (gma)LOC100796195 (gma)LOC100804035 (gma)LOC100814891 (gma)CD4B (sly)CD4A (sly)LOC103641592 (zma)LOC103857258 (bra)LOC103873112 (bra)LOC103874893 (bra)
Subcellular
localization
wolf
chlo 10  (predict for NP_568746.1)
Subcellular
localization
TargetP
chlo 8,  mito 3  (predict for NP_568746.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with CLPC1 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
9.9 VAR2 FtsH extracellular protease family [detail] 817646
8.7 HDS 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [detail] 836181
8.2 PREP1 presequence protease 1 [detail] 821451
6.8 TED4 Plant heme oxygenase (decyclizing) family protein [detail] 817208
Coexpressed
gene list
[Coexpressed gene list for CLPC1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248480_at
248480_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248480_at
248480_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
248480_at
248480_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 835165    
Refseq ID (protein) NP_568746.1 


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