[←][→] ath   AT5G51120 Gene
functional annotation
Function   polyadenylate-binding protein 1  
GO BP
GO:0006397 [list] [network] mRNA processing  (376 genes)  IEA  
GO CC
GO:0016607 [list] [network] nuclear speck  (86 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IEA  
GO MF
GO:0008143 [list] [network] poly(A) binding  (19 genes)  IDA  
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03015 [list] [network] mRNA surveillance pathway (115 genes)
Protein NP_001190511.1  NP_001190512.1  NP_568751.1 
BLAST NP_001190511.1  NP_001190512.1  NP_568751.1 
Orthologous [Ortholog page] AT5G10350 (ath)  AT5G65260 (ath)  LOC4330785 (osa)  LOC4340509 (osa)  LOC7456678 (ppo)  LOC7492020 (ppo)  LOC11406230 (mtr)  LOC11433289 (mtr)  LOC25501878 (mtr)  LOC100194063 (zma)  LOC100242522 (vvi)  LOC100282115 (zma)  LOC100285979 (zma)  LOC100527139 (gma)  LOC100527545 (gma)  LOC100784473 (gma)  LOC100789721 (gma)  LOC100791351 (gma)  LOC100809403 (gma)  LOC100855316 (vvi)  LOC101247002 (sly)  LOC101260498 (sly)  LOC101268437 (sly)  LOC103855290 (bra)  LOC103857200 (bra)  LOC103864862 (bra)  LOC103873956 (bra) 
Subcellular
localization
wolf
nucl 8,  vacu 1  (predict for NP_001190511.1)
chlo 6,  cyto 3,  chlo_mito 3  (predict for NP_001190512.1)
nucl 9  (predict for NP_568751.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001190511.1)
other 9  (predict for NP_001190512.1)
other 8  (predict for NP_568751.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 3
Genes directly connected with PABN1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.5 THO7 Tho complex subunit 7/Mft1p [detail] 821174
6.3 AT5G63440 hypothetical protein (DUF167) [detail] 836463
6.2 AT3G07170 Sterile alpha motif (SAM) domain-containing protein [detail] 819904
Coexpressed
gene list		 [Coexpressed gene list for PABN1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248447_at
248447_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248447_at
248447_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248447_at
248447_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835186      
Refseq ID (protein) NP_001190511.1 
NP_001190512.1 
NP_568751.1 


The preparation time of this page was 0.2 [sec].