[←][→] ath   At5g51140 Gene
functional annotation
Function   Pseudouridine synthase family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IEA  
GO MF
GO:0009982 [list] [network] pseudouridine synthase activity  (19 genes)  TAS  
KEGG
Protein NP_001190513.1  NP_199927.1 
BLAST NP_001190513.1  NP_199927.1 
Orthologous [Ortholog page] LOC7454741 (ppo)  LOC9269812 (osa)  LOC11424387 (mtr)  LOC100811500 (gma)  LOC101254284 (sly)  LOC103852163 (bra)  LOC103857197 (bra)  LOC123105416 (tae)  LOC123113687 (tae)  LOC123123215 (tae)  LOC123452724 (hvu) 
Subcellular
localization
wolf
cyto 6,  nucl 1,  cysk 1,  cysk_plas 1,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_001190513.1)
cyto 7,  nucl 1,  chlo 1,  cysk 1,  nucl_plas 1  (predict for NP_199927.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001190513.1)
other 9  (predict for NP_199927.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
ath03015 mRNA surveillance pathway 2
Genes directly connected with AT5G51140 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.3 LCBK2 Diacylglycerol kinase family protein [detail] 819217
6.2 AT2G04540 Beta-ketoacyl synthase [detail] 814996
6.0 AT5G60940 Transducin/WD40 repeat-like superfamily protein [detail] 836215
5.8 AT3G52210 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 824386
5.7 AT3G55080 SET domain-containing protein [detail] 824674
5.7 AT5G48335 uncharacterized protein [detail] 2746200
Coexpressed
gene list		 [Coexpressed gene list for AT5G51140]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248446_at
248446_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248446_at
248446_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248446_at
248446_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835188      
Refseq ID (protein) NP_001190513.1 
NP_199927.1 


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