[←][→] ath   AT5G51170 Gene
functional annotation
Function   U6 snRNA phosphodiesterase-like protein  
GO BP
GO:0034477 [list] [network] U6 snRNA 3'-end processing  (1 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0004518 [list] [network] nuclease activity  (252 genes)  IEA  
KEGG
Protein NP_001078743.1  NP_001331242.1  NP_001331243.1  NP_568753.1 
BLAST NP_001078743.1  NP_001331242.1  NP_001331243.1  NP_568753.1 
Orthologous [Ortholog page] LOC4330165 (osa)  LOC7457594 (ppo)  LOC25480021 (mtr)  LOC25480238 (mtr)  LOC100245880 (vvi)  LOC100275088 (zma)  LOC100804441 (gma)  LOC101244935 (sly)  LOC103864859 (bra) 
Subcellular
localization
wolf
cyto 6,  nucl 1,  chlo 1,  plas 1,  E.R. 1,  cysk_nucl 1,  E.R._plas 1  (predict for NP_001078743.1)
cyto 7,  nucl 1,  chlo 1,  cysk 1,  nucl_plas 1  (predict for NP_001331242.1)
extr 4,  vacu 2,  chlo 1,  cyto 1  (predict for NP_001331243.1)
cyto 9,  chlo 1,  E.R. 1  (predict for NP_568753.1)
Subcellular
localization
TargetP
other 8,  chlo 5  (predict for NP_001078743.1)
other 7,  chlo 4  (predict for NP_001331242.1)
scret 9  (predict for NP_001331243.1)
other 8,  chlo 5  (predict for NP_568753.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
Genes directly connected with AT5G51170 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.4 CUTA Nitrogen regulatory PII-like, alpha/beta [detail] 817940
6.4 AT5G45360 F-box family protein [detail] 834572
6.3 AT5G66240 Transducin/WD40 repeat-like superfamily protein [detail] 836756
5.8 AT5G07950 hypothetical protein [detail] 830689
5.7 AT5G42470 BRCA1-A complex subunit BRE-like protein [detail] 834254
5.7 RHB1A RING-H2 finger B1A [detail] 828093
5.6 AT1G49170 hypothetical protein [detail] 841340
5.6 CFIM-25 homolog of CFIM-25 [detail] 829104
5.3 AT5G10710 centromere protein O [detail] 830936
5.3 AT1G56090 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 842061
Coexpressed
gene list		 [Coexpressed gene list for AT5G51170]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248445_at
248445_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248445_at
248445_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248445_at
248445_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835191      
Refseq ID (protein) NP_001078743.1 
NP_001331242.1 
NP_001331243.1 
NP_568753.1 


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