[←][→] ath   At5g51170 Gene
functional annotation
Function   U6 snRNA phosphodiesterase-like protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0034477 [list] [network] U6 snRNA 3'-end processing  (1 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_001078743.1  NP_001331242.1  NP_001331243.1  NP_568753.1 
BLAST NP_001078743.1  NP_001331242.1  NP_001331243.1  NP_568753.1 
Orthologous [Ortholog page] LOC4330165 (osa)  LOC7457594 (ppo)  LOC18109056 (ppo)  LOC25480021 (mtr)  LOC25480238 (mtr)  LOC100804441 (gma)  LOC101244935 (sly)  LOC103864859 (bra)  LOC123130732 (tae)  LOC123137765 (tae)  LOC123141590 (tae)  LOC123403769 (hvu) 
Subcellular
localization
wolf
cyto 6,  nucl 1,  chlo 1,  plas 1,  E.R. 1,  cysk_nucl 1,  E.R._plas 1  (predict for NP_001078743.1)
cyto 7,  nucl 1,  chlo 1,  cysk 1,  nucl_plas 1  (predict for NP_001331242.1)
extr 4,  vacu 2,  chlo 1,  cyto 1  (predict for NP_001331243.1)
cyto 9,  chlo 1,  E.R. 1  (predict for NP_568753.1)
Subcellular
localization
TargetP
other 8,  chlo 5  (predict for NP_001078743.1)
other 7,  chlo 4  (predict for NP_001331242.1)
scret 9  (predict for NP_001331243.1)
other 8,  chlo 5  (predict for NP_568753.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G51170 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.6 AT3G05250 RING/U-box superfamily protein [detail] 819689
6.4 AT5G45360 F-box family protein [detail] 834572
6.2 AT5G04910 DNA repair REX1-B protein [detail] 830373
6.1 AT5G07950 uncharacterized protein [detail] 830689
5.9 AT1G65000 F-box only protein [detail] 842808
5.3 AT3G19520 hypothetical protein (DUF626) [detail] 821488
4.5 AT4G34540 NmrA-like negative transcriptional regulator family protein [detail] 829605
Coexpressed
gene list		 [Coexpressed gene list for AT5G51170]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248445_at
248445_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248445_at
248445_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248445_at
248445_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835191      
Refseq ID (protein) NP_001078743.1 
NP_001331242.1 
NP_001331243.1 
NP_568753.1 


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