[←][→] ath   At5g51660 Gene
functional annotation
Function   cleavage and polyadenylation specificity factor 160      
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0003676 [list] [network] nucleic acid binding  (3100 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath03015 [list] [network] mRNA surveillance pathway (119 genes)
Protein NP_001331729.1  NP_001331730.1  NP_001331731.1  NP_199979.2 
BLAST NP_001331729.1  NP_001331730.1  NP_001331731.1  NP_199979.2 
Orthologous [Ortholog page] LOC7464309 (ppo)  LOC9266269 (osa)  LOC25497136 (mtr)  LOC100785543 (gma)  LOC100801803 (gma)  LOC101246111 (sly)  LOC103852133 (bra)  LOC123043369 (tae)  LOC123187189 (tae)  LOC123424542 (hvu) 
Subcellular
localization
wolf
cyto 4,  nucl 4,  chlo 1  (predict for NP_001331729.1)
cyto 6,  chlo 2,  nucl 1  (predict for NP_001331730.1)
cyto 4,  nucl 4,  chlo 1  (predict for NP_001331731.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_199979.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001331729.1)
other 8  (predict for NP_001331730.1)
other 8  (predict for NP_001331731.1)
other 8  (predict for NP_199979.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 5
ath03020 RNA polymerase 2
ath03015 mRNA surveillance pathway 2
Genes directly connected with CPSF160 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
12.5 SAR1 SUPPRESSOR OF AUXIN RESISTANCE1 [detail] 840234
11.2 AT3G14120 nuclear pore complex protein [detail] 820629
9.5 NRPC2 nuclear RNA polymerase C2 [detail] 834550
7.1 AT3G20010 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein [detail] 821539
7.0 AGO4 Argonaute family protein [detail] 817246
5.1 HEB1 ARM repeat superfamily protein [detail] 842804
Coexpressed
gene list		 [Coexpressed gene list for CPSF160]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248418_at
248418_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248418_at
248418_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248418_at
248418_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835240      
Refseq ID (protein) NP_001331729.1 
NP_001331730.1 
NP_001331731.1 
NP_199979.2 


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