[←][→] ath   At5g52020 Gene
functional annotation
Function   Integrase-type DNA-binding superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0019760 [list] [network] glucosinolate metabolic process  (201 genes)  IMP  
GO:0050832 [list] [network] defense response to fungus  (705 genes)  IEP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
KEGG
Protein NP_200015.1 
BLAST NP_200015.1 
Orthologous [Ortholog page] HRD (ath)  AT1G12630 (ath)  LOC4331412 (osa)  LOC7455852 (ppo)  LOC7473558 (ppo)  LOC7479256 (ppo)  LOC7482152 (ppo)  LOC7490917 (ppo)  LOC7495637 (ppo)  LOC9270349 (osa)  LOC9272515 (osa)  LOC11422839 (mtr)  LOC25493649 (mtr)  LOC100305846 (gma)  LOC100776717 (gma)  LOC100778793 (gma)  LOC100782443 (gma)  LOC100793589 (gma)  LOC100799620 (gma)  LOC100811020 (gma)  LOC100811614 (gma)  LOC100813560 (gma)  LOC100813781 (gma)  LOC101245414 (sly)  LOC101246746 (sly)  LOC101260455 (sly)  LOC101262848 (sly)  LOC101268109 (sly)  LOC103832641 (bra)  LOC103836150 (bra)  LOC103838303 (bra)  LOC103838348 (bra)  LOC103852118 (bra)  LOC103857155 (bra)  LOC103857626 (bra)  LOC103865547 (bra)  LOC120577186 (mtr)  LOC123041761 (tae)  LOC123049721 (tae)  LOC123090336 (tae)  LOC123100611 (tae)  LOC123101594 (tae)  LOC123108418 (tae)  LOC123115048 (tae)  LOC123120931 (tae)  LOC123127988 (tae)  LOC123137638 (tae)  LOC123145086 (tae)  LOC123185816 (tae)  LOC123397144 (hvu)  LOC123402291 (hvu)  LOC123430639 (hvu)  LOC123447437 (hvu) 
Subcellular
localization
wolf
chlo 4,  nucl 4,  cyto 1,  mito 1,  plas 1,  extr 1,  mito_plas 1,  cyto_plas 1  (predict for NP_200015.1)
Subcellular
localization
TargetP
chlo 9,  other 3  (predict for NP_200015.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
Genes directly connected with AT5G52020 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.7 DDF1 Integrase-type DNA-binding superfamily protein [detail] 837817
6.7 AT2G17660 RPM1-interacting protein 4 (RIN4) family protein [detail] 816273
6.3 SRO5 uncharacterized protein [detail] 836372
Coexpressed
gene list		 [Coexpressed gene list for AT5G52020]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248400_at
248400_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248400_at
248400_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248400_at
248400_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835277      
Refseq ID (protein) NP_200015.1 


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