[←][→] ath   AT5G52230 Gene
functional annotation
Function   methyl-CPG-binding domain protein 13  
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0008327 [list] [network] methyl-CpG binding  (16 genes)  ISS  
KEGG
Protein NP_001190520.1  NP_001331264.1  NP_200036.1 
BLAST NP_001190520.1  NP_001331264.1  NP_200036.1 
Orthologous [Ortholog page] mbd113 (zma)  LOC4335329 (osa)  LOC4336978 (osa)  LOC7454489 (ppo)  LOC7484393 (ppo)  LOC11439235 (mtr)  LOC25502024 (mtr)  LOC100263341 (vvi)  LOC100263513 (vvi)  mbd123 (zma)  LOC100778412 (gma)  LOC100782433 (gma)  LOC100807457 (gma)  LOC101246025 (sly)  LOC101264354 (sly)  LOC102664718 (gma)  LOC102666403 (gma)  LOC102669254 (gma)  LOC103832554 (bra)  LOC104881692 (vvi)  LOC106799024 (gma)  LOC107275718 (osa)  LOC109939212 (zma)  LOC112936133 (osa) 
Subcellular
localization
wolf
nucl 9,  cyto 1  (predict for NP_001190520.1)
nucl 9,  cyto 1  (predict for NP_001331264.1)
nucl 9,  cyto 1  (predict for NP_200036.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001190520.1)
other 9  (predict for NP_001331264.1)
other 9  (predict for NP_200036.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00310 Lysine degradation 2
Genes directly connected with MBD13 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.8 PRP39-2 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 834683
5.6 AT4G03000 RING/U-box superfamily protein [detail] 828112
5.4 MOM ATP-dependent helicase family protein [detail] 837322
4.6 AT4G14840 spindle assembly abnormal protein [detail] 827141
Coexpressed
gene list		 [Coexpressed gene list for MBD13]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248342_at
248342_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248342_at
248342_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248342_at
248342_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835299      
Refseq ID (protein) NP_001190520.1 
NP_001331264.1 
NP_200036.1 


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