[←][→] ath   AT5G52250 Gene
functional annotation
Function   Transducin/WD40 repeat-like superfamily protein  
GO BP
GO:0043496 [list] [network] regulation of protein homodimerization activity  (3 genes)  IDA  
GO:0010218 [list] [network] response to far red light  (54 genes)  IEP  
GO:0010224 [list] [network] response to UV-B  (71 genes)  IBA IEP IGI  
GO:0010114 [list] [network] response to red light  (74 genes)  IEP  
GO:0009908 [list] [network] flower development  (447 genes)  IEA  
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (130 genes)  ISS  
GO:0005829 [list] [network] cytosol  (3506 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04120 [list] [network] Ubiquitin mediated proteolysis (143 genes)
ath04712 [list] [network] Circadian rhythm - plant (36 genes)
Protein NP_200038.1 
BLAST NP_200038.1 
Orthologous [Ortholog page] RUP2 (ath)  LOC7454503 (ppo)  LOC7484386 (ppo)  LOC100257557 (vvi)  LOC100262691 (vvi)  LOC101259391 (sly)  LOC103626521 (zma)  LOC103857138 (bra)  LOC103865631 (bra)  LOC104878374 (vvi)  LOC107279948 (osa) 
Subcellular
localization
wolf
cyto 4,  extr 3,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for NP_200038.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_200038.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
ath04712 Circadian rhythm - plant 3
ath04120 Ubiquitin mediated proteolysis 3
ath00940 Phenylpropanoid biosynthesis 2
ath00941 Flavonoid biosynthesis 2
Genes directly connected with RUP1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.5 RUP2 Transducin/WD40 repeat-like superfamily protein [detail] 832438
6.1 MAPKKK13 mitogen-activated protein kinase kinase kinase 13 [detail] 837226
5.5 MAX2 RNI-like superfamily protein [detail] 818862
4.8 AT1G13670 hypothetical protein [detail] 837928
Coexpressed
gene list		 [Coexpressed gene list for RUP1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248347_at
248347_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248347_at
248347_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248347_at
248347_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835301      
Refseq ID (protein) NP_200038.1 


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