[←][→] ath   At5g52250 Gene
functional annotation
Function   Transducin/WD40 repeat-like superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0043254 [list] [network] regulation of protein-containing complex assembly  (25 genes)  IDA  
GO:0010218 [list] [network] response to far red light  (48 genes)  IEP  
GO:0010224 [list] [network] response to UV-B  (75 genes)  IEP IGI  
GO:0010114 [list] [network] response to red light  (101 genes)  IEP  
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (121 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath04120 [list] [network] Ubiquitin mediated proteolysis (155 genes)
ath04712 [list] [network] Circadian rhythm - plant (39 genes)
Protein NP_200038.1 
BLAST NP_200038.1 
Orthologous [Ortholog page] RUP2 (ath)  LOC7454503 (ppo)  LOC7484386 (ppo)  LOC101259391 (sly)  LOC103857138 (bra)  LOC103865631 (bra)  LOC107279948 (osa)  LOC123130067 (tae)  LOC123133345 (tae)  LOC123143163 (tae)  LOC123403417 (hvu) 
Subcellular
localization
wolf
cyto 4,  extr 3,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for NP_200038.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_200038.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00052 Galactose metabolism 2
ath00500 Starch and sucrose metabolism 2
ath04120 Ubiquitin mediated proteolysis 2
ath04712 Circadian rhythm - plant 2
Genes directly connected with RUP1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.3 RUP2 Transducin/WD40 repeat-like superfamily protein [detail] 832438
5.8 MAPKKK13 mitogen-activated protein kinase kinase kinase 13 [detail] 837226
5.6 MAX2 RNI-like superfamily protein [detail] 818862
5.5 AT1G13670 uncharacterized protein [detail] 837928
5.3 ATBETAFRUCT4 Glycosyl hydrolases family 32 protein [detail] 837777
4.8 AT5G16340 AMP-dependent synthetase and ligase family protein [detail] 831495
Coexpressed
gene list		 [Coexpressed gene list for RUP1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248347_at
248347_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248347_at
248347_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248347_at
248347_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835301      
Refseq ID (protein) NP_200038.1 


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