[←][→] ath   At5g52310 Gene
functional annotation
Function   low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009609 [list] [network] response to symbiotic bacterium  (2 genes)  IEP  
GO:0010555 [list] [network] response to mannitol  (20 genes)  IEP  
GO:0009269 [list] [network] response to desiccation  (25 genes)  IMP  
GO:1902074 [list] [network] response to salt  (38 genes)  IEP  
GO:0042538 [list] [network] hyperosmotic salinity response  (58 genes)  IEP  
GO:2000280 [list] [network] regulation of root development  (75 genes)  IDA  
GO:0007623 [list] [network] circadian rhythm  (123 genes)  IEP  
GO:0000302 [list] [network] response to reactive oxygen species  (141 genes)  IEP  
GO:0010150 [list] [network] leaf senescence  (195 genes)  IMP  
GO:0009409 [list] [network] response to cold  (472 genes)  IEP  
GO:0009651 [list] [network] response to salt stress  (607 genes)  IEP  
GO:0009611 [list] [network] response to wounding  (816 genes)  IEP  
GO:0006970 [list] [network] response to osmotic stress  (883 genes)  IGI  
GO:0009414 [list] [network] response to water deprivation  (1006 genes)  IEP  
GO:0009737 [list] [network] response to abscisic acid  (1086 genes)  IEP  
GO CC
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA  
GO MF
KEGG
Protein NP_200044.1 
BLAST NP_200044.1 
Orthologous [Ortholog page] PM39 (gma)  AT4G25580 (ath)  LTI65 (ath)  LOC7484381 (ppo)  LOC18105900 (ppo)  LOC25485071 (mtr)  LOC25485072 (mtr)  LOC25496346 (mtr)  LOC100790856 (gma)  LOC100791989 (gma)  LOC100801440 (gma)  LOC100806075 (gma)  LOC100810490 (gma)  LOC100813715 (gma)  LOC101266908 (sly)  LOC102660061 (gma)  LOC103834864 (bra)  LOC103852103 (bra)  LOC103852107 (bra)  LOC103857129 (bra)  LOC103861574 (bra)  LOC104649215 (sly)  LOC106796485 (gma)  LOC112324290 (ppo) 
Subcellular
localization
wolf
nucl 8,  vacu 1  (predict for NP_200044.1)
Subcellular
localization
TargetP
other 9  (predict for NP_200044.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with LTI78 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
12.7 ERD10 Dehydrin family protein [detail] 838633
11.2 COR413-PM1 cold regulated 413 plasma membrane 1 [detail] 816092
11.0 COR47 cold-regulated 47 [detail] 838632
10.9 LTI30 dehydrin family protein [detail] 824261
10.1 AT1G16850 uncharacterized protein [detail] 838256
9.7 COR15A cold-regulated 15a [detail] 818854
9.1 AT1G51090 Heavy metal transport/detoxification superfamily protein [detail] 841532
8.2 AT5G17460 glutamyl-tRNA (Gln) amidotransferase subunit C [detail] 831612
8.1 HVA22D HVA22 homologue D [detail] 828598
7.4 AT4G30650 Low temperature and salt responsive protein family [detail] 829188
7.4 AT1G78070 Transducin/WD40 repeat-like superfamily protein [detail] 844142
7.0 GolS3 galactinol synthase 3 [detail] 837457
6.8 AT3G55760 uncharacterized protein [detail] 824742
6.2 AT1G21790 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [detail] 838783
6.1 G3Pp4 Major facilitator superfamily protein [detail] 827470
4.8 AT1G68500 uncharacterized protein [detail] 843179
Coexpressed
gene list		 [Coexpressed gene list for LTI78]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248337_at
248337_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248337_at
248337_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248337_at
248337_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835307      
Refseq ID (protein) NP_200044.1 


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