[←][→] ath   AT5G52310 Gene
functional annotation
Function   low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)  
GO BP
GO:0009609 [list] [network] response to symbiotic bacterium  (2 genes)  IEP  
GO:0010555 [list] [network] response to mannitol  (18 genes)  IEP  
GO:1902074 [list] [network] response to salt  (20 genes)  IEP  
GO:0009269 [list] [network] response to desiccation  (24 genes)  IMP  
GO:0042538 [list] [network] hyperosmotic salinity response  (57 genes)  IEP  
GO:2000280 [list] [network] regulation of root development  (79 genes)  IDA  
GO:0007623 [list] [network] circadian rhythm  (111 genes)  IEP  
GO:0010150 [list] [network] leaf senescence  (111 genes)  IMP  
GO:0000302 [list] [network] response to reactive oxygen species  (152 genes)  IEP  
GO:0009611 [list] [network] response to wounding  (212 genes)  IEP  
GO:0009414 [list] [network] response to water deprivation  (361 genes)  IEP  
GO:0009409 [list] [network] response to cold  (411 genes)  IEP  
GO:0009651 [list] [network] response to salt stress  (485 genes)  IEP  
GO:0006970 [list] [network] response to osmotic stress  (563 genes)  IGI  
GO:0009737 [list] [network] response to abscisic acid  (574 genes)  IEP  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
KEGG
Protein NP_200044.1 
BLAST NP_200044.1 
Orthologous [Ortholog page] PM39 (gma)  AT4G25580 (ath)  LTI65 (ath)  LOC7484381 (ppo)  LOC25485071 (mtr)  LOC25485072 (mtr)  LOC25496346 (mtr)  LOC100260796 (vvi)  LOC100790856 (gma)  LOC100791989 (gma)  LOC100801440 (gma)  LOC100806075 (gma)  LOC100810490 (gma)  LOC100813715 (gma)  LOC101266908 (sly)  LOC102660061 (gma)  LOC103834864 (bra)  LOC103852103 (bra)  LOC103852107 (bra)  LOC103857129 (bra)  LOC103861574 (bra)  LOC104649215 (sly)  LOC106796485 (gma) 
Subcellular
localization
wolf
nucl 8,  vacu 1  (predict for NP_200044.1)
Subcellular
localization
TargetP
other 9  (predict for NP_200044.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with LTI78 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.5 ERD10 Dehydrin family protein [detail] 838633
10.5 COR47 cold-regulated 47 [detail] 838632
10.2 LTI30 dehydrin family protein [detail] 824261
9.7 KIN2 stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6) [detail] 831454
9.6 LEA14 Late embryogenesis abundant protein [detail] 837071
9.4 COR15A cold-regulated 15a [detail] 818854
9.4 AT1G16850 transmembrane protein [detail] 838256
9.1 COR413-PM1 cold regulated 413 plasma membrane 1 [detail] 816092
8.5 AT1G51090 Heavy metal transport/detoxification superfamily protein [detail] 841532
8.2 GolS3 galactinol synthase 3 [detail] 837457
7.4 AT4G30650 Low temperature and salt responsive protein family [detail] 829188
6.8 AT1G78070 Transducin/WD40 repeat-like superfamily protein [detail] 844142
6.5 AT3G55760 hypothetical protein [detail] 824742
6.2 AT1G21790 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [detail] 838783
4.8 CIPK25 CBL-interacting protein kinase 25 [detail] 832582
4.6 AT5G10410 ENTH/ANTH/VHS superfamily protein [detail] 830905
4.6 AT1G70640 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein [detail] 843401
Coexpressed
gene list		 [Coexpressed gene list for LTI78]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248337_at
248337_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248337_at
248337_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248337_at
248337_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835307      
Refseq ID (protein) NP_200044.1 


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