[←][→] ath   AT5G52380 Gene
functional annotation
Function   VASCULAR-RELATED NAC-DOMAIN 6  
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4187 genes)  IEA  
KEGG
Protein NP_200051.1 
BLAST NP_200051.1 
Orthologous [Ortholog page] LOC4336623 (osa)  LOC7474047 (ppo)  LOC100193829 (zma)  LOC100242054 (vvi)  LOC101268652 (sly)  LOC103832511 (bra)  LOC103852266 (bra)  LOC103857125 (bra)  LOC112416234 (mtr) 
Subcellular
localization
wolf
nucl 8,  mito 1,  plas 1,  extr 1,  mito_plas 1  (predict for NP_200051.1)
Subcellular
localization
TargetP
other 3,  mito 3  (predict for NP_200051.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G52380 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.7 PPAN PETER PAN-like protein [detail] 836299
10.8 EDA14 embryo sac development arrest 14 [detail] 825207
10.8 AT1G80750 Ribosomal protein L30/L7 family protein [detail] 844414
9.9 AT1G07840 Sas10/Utp3/C1D family [detail] 837299
9.0 AT3G25940 TFIIB zinc-binding protein [detail] 822191
8.0 RH36 RNA helicase 36 [detail] 838197
7.4 AT3G49890 hypothetical protein [detail] 824151
6.0 AT5G61880 Protein Transporter, Pam16 [detail] 836309
Coexpressed
gene list		 [Coexpressed gene list for AT5G52380]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248357_at
248357_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248357_at
248357_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248357_at
248357_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835314      
Refseq ID (protein) NP_200051.1 


The preparation time of this page was 0.9 [sec].