[←][→] ath   At5g52430 Gene
functional annotation
Function   hydroxyproline-rich glycoprotein family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:1901698 [list] [network] response to nitrogen compound  (723 genes)  IEA  
GO:0031347 [list] [network] regulation of defense response  (749 genes)  IEA  
GO:0009737 [list] [network] response to abscisic acid  (1086 genes)  IEA  
GO:0040007 [list] [network] growth  (1270 genes)  IEA  
GO:0007165 [list] [network] signal transduction  (2054 genes)  IEA  
GO:0098542 [list] [network] defense response to other organism  (2060 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_200056.1 
BLAST NP_200056.1 
Orthologous [Ortholog page] AT4G25620 (ath)  AT1G63720 (ath)  LOC4331183 (osa)  LOC7458183 (ppo)  LOC7472759 (ppo)  LOC7484370 (ppo)  LOC25496369 (mtr)  LOC25502061 (mtr)  LOC100777876 (gma)  LOC100787393 (gma)  LOC100791666 (gma)  LOC100798631 (gma)  LOC100806399 (gma)  LOC100814955 (gma)  LOC100818313 (gma)  LOC101254118 (sly)  LOC101260903 (sly)  LOC103832477 (bra)  LOC103838254 (bra)  LOC103861578 (bra)  LOC103863361 (bra)  LOC123129066 (tae)  LOC123139947 (tae)  LOC123146237 (tae)  LOC123402923 (hvu) 
Subcellular
localization
wolf
chlo 8,  vacu 1  (predict for NP_200056.1)
Subcellular
localization
TargetP
other 4,  chlo 3  (predict for NP_200056.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 3
Genes directly connected with AT5G52430 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.3 AT4G25620 hydroxyproline-rich glycoprotein family protein [detail] 828667
5.6 CCR2 CRINKLY4 related 2 [detail] 818503
5.3 KAN Homeodomain-like superfamily protein [detail] 831518
Coexpressed
gene list		 [Coexpressed gene list for AT5G52430]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248360_at
248360_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248360_at
248360_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248360_at
248360_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835319      
Refseq ID (protein) NP_200056.1 


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