[←][→] ath   At5g52470 Gene
functional annotation
Function   fibrillarin 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0001510 [list] [network] RNA methylation  (28 genes)  IGI  
GO:0006364 [list] [network] rRNA processing  (169 genes)  IGI  
GO CC
GO:0005730 [list] [network] nucleolus  (387 genes)  HDA IDA ISS  
GO:0005829 [list] [network] cytosol  (2559 genes)  RCA  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0030515 [list] [network] snoRNA binding  (3 genes)  ISS  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (96 genes)
Protein NP_001119418.1  NP_568772.3 
BLAST NP_001119418.1  NP_568772.3 
Orthologous [Ortholog page] FIB2 (ath)  AT5G52490 (ath)  LOC4331181 (osa)  LOC7473260 (ppo)  LOC7474066 (ppo)  LOC7484920 (ppo)  LOC9266224 (osa)  LOC11440720 (mtr)  LOC25496400 (mtr)  LOC100788688 (gma)  LOC100789137 (gma)  LOC100797625 (gma)  LOC100814656 (gma)  LOC101261490 (sly)  LOC103834862 (bra)  LOC103852096 (bra)  LOC103861582 (bra)  LOC103863368 (bra)  LOC123129055 (tae)  LOC123139921 (tae)  LOC123146227 (tae)  LOC123159877 (tae)  LOC123165498 (tae)  LOC123404338 (hvu)  LOC123407385 (hvu) 
Subcellular
localization
wolf
cyto 5,  chlo 4  (predict for NP_001119418.1)
cyto 6,  chlo 4  (predict for NP_568772.3)
Subcellular
localization
TargetP
mito 4,  other 4  (predict for NP_001119418.1)
mito 4,  other 4  (predict for NP_568772.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 7
ath03008 Ribosome biogenesis in eukaryotes 3
Genes directly connected with FIB1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
15.2 AT3G03920 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein [detail] 821062
11.0 STRS2 DEA(D/H)-box RNA helicase family protein [detail] 830763
10.1 AT3G62870 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [detail] 825462
9.6 AT2G19540 Transducin family protein / WD-40 repeat family protein [detail] 816473
8.0 AT2G47790 Transducin/WD40 repeat-like superfamily protein [detail] 819391
Coexpressed
gene list		 [Coexpressed gene list for FIB1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248362_at
248362_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248362_at
248362_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248362_at
248362_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835323      
Refseq ID (protein) NP_001119418.1 
NP_568772.3 


The preparation time of this page was 0.1 [sec].