[←][→] ath   At5g52780 Gene
functional annotation
Function   transmembrane protein, putative (DUF3464)    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010258 [list] [network] NADH dehydrogenase complex (plastoquinone) assembly  (8 genes)  IMP  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (315 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO MF
KEGG
Protein NP_200090.1 
BLAST NP_200090.1 
Orthologous [Ortholog page] LOC4349221 (osa)  LOC7468347 (ppo)  LOC25496484 (mtr)  LOC100782877 (gma)  LOC101259028 (sly)  LOC103852079 (bra)  LOC123049347 (tae)  LOC123123479 (tae)  LOC123181411 (tae)  LOC123435427 (hvu) 
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for NP_200090.1)
Subcellular
localization
TargetP
mito 8,  chlo 4  (predict for NP_200090.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 2
Genes directly connected with AT5G52780 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.5 CRR7 chlororespiratory reduction 7 [detail] 833917
8.2 CRR42 DUF3148 family protein [detail] 832218
8.1 CRR6 chlororespiratory reduction 6 [detail] 819403
7.4 SSL4 strictosidine synthase-like 4 [detail] 824305
6.2 AT2G03550 alpha/beta-Hydrolases superfamily protein [detail] 814884
6.0 NF-YB3 nuclear factor Y, subunit B3 [detail] 827101
4.1 AT1G06645 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 3766668
Coexpressed
gene list		 [Coexpressed gene list for AT5G52780]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248329_at
248329_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248329_at
248329_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248329_at
248329_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835355      
Refseq ID (protein) NP_200090.1 


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