[←][→] ath   At5g52960 Gene
functional annotation
Function   tRNA dimethylallyltransferase    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0008610 [list] [network] lipid biosynthetic process  (657 genes)  IEA  
GO:0048316 [list] [network] seed development  (1294 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (1981 genes)  IEA  
GO CC
GO:0009532 [list] [network] plastid stroma  (716 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_200108.1 
BLAST NP_200108.1 
Orthologous [Ortholog page] LOC4339652 (osa)  LOC7489800 (ppo)  LOC18106328 (ppo)  LOC25496022 (mtr)  LOC100801986 (gma)  LOC100814763 (gma)  LOC101256845 (sly)  LOC103844776 (bra)  LOC123069035 (tae)  LOC123147268 (tae)  LOC123183193 (tae)  LOC123451034 (hvu) 
Subcellular
localization
wolf
chlo 7,  chlo_mito 5,  mito 1  (predict for NP_200108.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_200108.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 8
Genes directly connected with AT5G52960 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.5 AT3G60370 FKBP-like peptidyl-prolyl cis-trans isomerase family protein [detail] 825208
8.3 AT5G65220 Ribosomal L29 family protein [detail] 836647
8.2 HCF106 Bacterial sec-independent translocation protein mttA/Hcf106 [detail] 835320
6.9 AT4G30620 Putative BCR, YbaB family COG0718 [detail] 829185
Coexpressed
gene list		 [Coexpressed gene list for AT5G52960]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248285_at
248285_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248285_at
248285_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248285_at
248285_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835373      
Refseq ID (protein) NP_200108.1 


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