[][] ath   AT5G52960 Gene
functional annotation
Function   tRNA dimethylallyltransferase
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  HDA ISM  
GO MF
GO:0016740 [list] [network] transferase activity  (3833 genes)  IEA  
KEGG
Protein NP_200108.1 
BLAST NP_200108.1 
Orthologous [Ortholog page] LOC4339652 (osa)LOC25496022 (mtr)LOC100241531 (vvi)LOC100277162 (zma)LOC100801986 (gma)LOC100814763 (gma)LOC101256845 (sly)LOC103844776 (bra)
Subcellular
localization
wolf
chlo 7,  chlo_mito 5,  mito 1  (predict for NP_200108.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_200108.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 9
Genes directly connected with AT5G52960 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
7.7 HCF106 Bacterial sec-independent translocation protein mttA/Hcf106 [detail] 835320
7.7 AT4G17560 Ribosomal protein L19 family protein [detail] 827471
7.7 AT2G43030 Ribosomal protein L3 family protein [detail] 818905
6.9 SCY1 SECY homolog 1 [detail] 816386
Coexpressed
gene list
[Coexpressed gene list for AT5G52960]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248285_at
248285_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248285_at
248285_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
248285_at
248285_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 835373    
Refseq ID (protein) NP_200108.1 


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