[←][→] ath   At5g52970 Gene
functional annotation
Function   thylakoid lumen 15.0 kDa protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0009543 [list] [network] chloroplast thylakoid lumen  (50 genes)  HDA  
GO:0031977 [list] [network] thylakoid lumen  (67 genes)  HDA  
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO MF
KEGG
Protein NP_001318791.1  NP_568781.1 
BLAST NP_001318791.1  NP_568781.1 
Orthologous [Ortholog page] LOC4343463 (osa)  LOC7467633 (ppo)  LOC25483980 (mtr)  LOC100795443 (gma)  LOC101245901 (sly)  LOC103850493 (bra)  LOC123043444 (tae)  LOC123051312 (tae)  LOC123187265 (tae)  LOC123424487 (hvu) 
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for NP_001318791.1)
chlo 6,  mito 4  (predict for NP_568781.1)
Subcellular
localization
TargetP
chlo 8,  mito 5  (predict for NP_001318791.1)
chlo 8,  mito 5  (predict for NP_568781.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 10
Genes directly connected with AT5G52970 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.3 AT4G17560 Ribosomal protein L19 family protein [detail] 827471
9.2 PRPL11 plastid ribosomal protein l11 [detail] 840194
8.9 AT5G47190 Ribosomal protein L19 family protein [detail] 834765
7.2 AT3G20930 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 821642
6.7 AT2G35450 catalytic/ hydrolase [detail] 818110
Coexpressed
gene list		 [Coexpressed gene list for AT5G52970]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248287_at
248287_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248287_at
248287_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248287_at
248287_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835375      
Refseq ID (protein) NP_001318791.1 
NP_568781.1 


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