[←][→] ath   At5g53110 Gene
functional annotation
Function   RING/U-box superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009404 [list] [network] toxin metabolic process  (116 genes)  IEA  
GO:0002237 [list] [network] response to molecule of bacterial origin  (118 genes)  IEA  
GO:0048878 [list] [network] chemical homeostasis  (417 genes)  IEA  
GO:0009751 [list] [network] response to salicylic acid  (438 genes)  IEA  
GO:0050832 [list] [network] defense response to fungus  (705 genes)  IEA  
GO:0042742 [list] [network] defense response to bacterium  (980 genes)  IEA  
GO:0044248 [list] [network] cellular catabolic process  (1086 genes)  IEA  
GO CC
GO MF
GO:0030247 [list] [network] polysaccharide binding  (94 genes)  IEA  
KEGG
Protein NP_200123.2 
BLAST NP_200123.2 
Orthologous [Ortholog page] LOC7465317 (ppo)  LOC7467090 (ppo)  LOC7475597 (ppo)  LOC7489828 (ppo)  LOC7489829 (ppo)  LOC11421651 (mtr)  LOC25502189 (mtr)  LOC25502192 (mtr)  LOC100810240 (gma)  LOC100818969 (gma)  LOC101253066 (sly)  LOC101256794 (sly)  LOC102661206 (gma)  LOC103844790 (bra)  LOC103852056 (bra)  LOC112325970 (ppo) 
Subcellular
localization
wolf
chlo 6,  mito 1,  nucl 1,  extr 1,  vacu 1,  cyto_mito 1,  mito_plas 1  (predict for NP_200123.2)
Subcellular
localization
TargetP
scret 9  (predict for NP_200123.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G53110 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.7 AT1G65690 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [detail] 842880
6.1 AT4G20000 VQ motif-containing protein [detail] 827745
6.0 AT1G51890 Leucine-rich repeat protein kinase family protein [detail] 841616
5.4 RTL1 RNAse II-like 1 [detail] 827212
5.2 AT2G46150 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [detail] 819222
Coexpressed
gene list		 [Coexpressed gene list for AT5G53110]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248298_at
248298_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248298_at
248298_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248298_at
248298_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835391      
Refseq ID (protein) NP_200123.2 


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