[][] ath   AT5G53370 Gene
functional annotation
Function   pectin methylesterase PCR fragment F
GO BP
GO:0045490 [list] [network] pectin catabolic process  (96 genes)  IEA  
GO:0042545 [list] [network] cell wall modification  (176 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0045330 [list] [network] aspartyl esterase activity  (67 genes)  IEA  
GO:0046910 [list] [network] pectinesterase inhibitor activity  (84 genes)  IBA  
GO:0030599 [list] [network] pectinesterase activity  (86 genes)  IBA ISS  
KEGG
Protein NP_001332265.1  NP_200149.1 
BLAST NP_001332265.1  NP_200149.1 
Orthologous [Ortholog page] AT3G49220 (ath)LOC4329045 (osa)LOC7475195 (ppo)LOC7496396 (ppo)LOC9270906 (osa)LOC11432815 (mtr)LOC11441469 (mtr)LOC100258861 (vvi)LOC100285544 (zma)LOC100776752 (gma)LOC100808236 (gma)LOC101255775 (sly)LOC101258375 (sly)LOC103844813 (bra)LOC103852037 (bra)LOC103873080 (bra)LOC103873499 (bra)LOC103875179 (bra)LOC106796002 (gma)
Subcellular
localization
wolf
chlo 5,  chlo_mito 3,  cyto 2,  nucl 1,  plas 1,  vacu 1,  nucl_plas 1  (predict for NP_001332265.1)
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 1,  vacu 1,  E.R. 1,  cysk_nucl 1,  nucl_plas 1,  E.R._vacu 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_200149.1)
Subcellular
localization
TargetP
other 3  (predict for NP_001332265.1)
other 9  (predict for NP_200149.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PMEPCRF on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
4.3 LPR2 Cupredoxin superfamily protein [detail] 843444
4.3 CYP81H1 cytochrome P450, family 81, subfamily H, polypeptide 1 [detail] 829886
4.2 BLH1 BEL1-like homeodomain 1 [detail] 818167
Coexpressed
gene list
[Coexpressed gene list for PMEPCRF]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248263_at
248263_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248263_at
248263_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
248263_at
248263_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 835418    
Refseq ID (protein) NP_001332265.1 
NP_200149.1 


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