[←][→] ath   At5g53420 Gene
functional annotation
Function   CCT motif family protein      
GO BP
GO:0090548 [list] [network] response to nitrate starvation  (10 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_001032068.1  NP_001119425.1  NP_001331334.1  NP_001331335.1  NP_568793.1 
BLAST NP_001032068.1  NP_001119425.1  NP_001331334.1  NP_001331335.1  NP_568793.1 
Orthologous [Ortholog page] AT4G27900 (ath)  LOC4339814 (osa)  LOC7464259 (ppo)  LOC7464549 (ppo)  LOC11434187 (mtr)  LOC11446456 (mtr)  LOC100814332 (gma)  LOC100820570 (gma)  LOC101255179 (sly)  LOC103834787 (bra)  LOC103844818 (bra)  LOC103852031 (bra)  LOC103857081 (bra)  LOC123071108 (tae)  LOC123102023 (tae)  LOC123102028 (tae)  LOC123150041 (tae)  LOC123179734 (tae)  LOC123183430 (tae)  LOC123183648 (tae)  LOC123452846 (hvu)  LOC123452856 (hvu) 
Subcellular
localization
wolf
nucl 4,  chlo 2,  extr 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_001032068.1)
nucl 6,  cyto_nucl 4,  plas 1,  golg_plas 1,  chlo 1,  extr 1,  pero 1  (predict for NP_001119425.1)
nucl 4,  chlo 2,  extr 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_001331334.1)
nucl 4,  chlo 2,  extr 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_001331335.1)
nucl 7,  cyto_nucl 4,  extr 1,  pero 1,  golg_plas 1  (predict for NP_568793.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001032068.1)
other 8  (predict for NP_001119425.1)
other 8  (predict for NP_001331334.1)
other 8  (predict for NP_001331335.1)
other 8  (predict for NP_568793.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 6
ath00520 Amino sugar and nucleotide sugar metabolism 2
ath01250 Biosynthesis of nucleotide sugars 2
Genes directly connected with AT5G53420 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.2 AT4G27900 CCT motif family protein [detail] 828903
5.7 TGA7 bZIP transcription factor family protein [detail] 844127
5.6 SEX4 dual specificity protein phosphatase (DsPTP1) family protein [detail] 824383
5.2 LOG8 Putative lysine decarboxylase family protein [detail] 831068
5.0 AT4G26950 senescence regulator (Protein of unknown function, DUF584) [detail] 828802
4.8 SPP2 sucrose-6F-phosphate phosphohydrolase 2 [detail] 824399
Coexpressed
gene list		 [Coexpressed gene list for AT5G53420]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248271_at
248271_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248271_at
248271_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248271_at
248271_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835423      
Refseq ID (protein) NP_001032068.1 
NP_001119425.1 
NP_001331334.1 
NP_001331335.1 
NP_568793.1 


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