[←][→] ath   At5g53490 Gene
functional annotation
Function   Tetratricopeptide repeat (TPR)-like superfamily protein      
GO BP
GO:0031329 [list] [network] regulation of cellular catabolic process  (69 genes)  IEA  
GO:0046700 [list] [network] heterocycle catabolic process  (123 genes)  IEA  
GO:0044270 [list] [network] cellular nitrogen compound catabolic process  (124 genes)  IEA  
GO:0019439 [list] [network] aromatic compound catabolic process  (137 genes)  IEA  
GO:1901361 [list] [network] organic cyclic compound catabolic process  (149 genes)  IEA  
GO:0065003 [list] [network] protein-containing complex assembly  (393 genes)  IEA  
GO:0008104 [list] [network] protein localization  (419 genes)  IEA  
GO:0009266 [list] [network] response to temperature stimulus  (843 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (1981 genes)  IEA  
GO CC
GO:0009543 [list] [network] chloroplast thylakoid lumen  (50 genes)  HDA  
GO:0031977 [list] [network] thylakoid lumen  (67 genes)  HDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (315 genes)  HDA  
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  HDA  
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001190531.1  NP_001330392.1  NP_200161.2  NP_851183.1 
BLAST NP_001190531.1  NP_001330392.1  NP_200161.2  NP_851183.1 
Orthologous [Ortholog page] LOC4349041 (osa)  LOC7464286 (ppo)  LOC25491136 (mtr)  LOC100785667 (gma)  LOC100801521 (gma)  LOC101264410 (sly)  LOC103844824 (bra)  LOC123047687 (tae)  LOC123123318 (tae)  LOC123181212 (tae)  LOC123433283 (hvu) 
Subcellular
localization
wolf
chlo 6,  E.R. 1,  E.R._vacu 1,  mito 1,  plas 1,  golg 1,  golg_plas 1,  mito_plas 1  (predict for NP_001190531.1)
chlo 6,  mito 1,  vacu 1  (predict for NP_001330392.1)
chlo 7,  mito 1,  vacu 1  (predict for NP_200161.2)
chlo 7,  mito 1,  vacu 1  (predict for NP_851183.1)
Subcellular
localization
TargetP
other 4  (predict for NP_001190531.1)
chlo 7  (predict for NP_001330392.1)
chlo 6  (predict for NP_200161.2)
chlo 6,  mito 3  (predict for NP_851183.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G53490 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.8 AT5G02160 uncharacterized protein [detail] 831910
8.6 PPD6 thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein) [detail] 824832
8.4 AT1G73655 FKBP-like peptidyl-prolyl cis-trans isomerase family protein [detail] 843700
4.5 BGAL2 beta-galactosidase 2 [detail] 824450
Coexpressed
gene list		 [Coexpressed gene list for AT5G53490]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248224_at
248224_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248224_at
248224_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248224_at
248224_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835431      
Refseq ID (protein) NP_001190531.1 
NP_001330392.1 
NP_200161.2 
NP_851183.1 


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