[←][→] ath   AT5G53550 Gene
functional annotation
Function   YELLOW STRIPE like 3  
GO BP
GO:0010039 [list] [network] response to iron ion  (24 genes)  IBA  
GO:0009624 [list] [network] response to nematode  (84 genes)  IEP  
GO:0048316 [list] [network] seed development  (717 genes)  IBA IGI  
GO:0055085 [list] [network] transmembrane transport  (778 genes)  IEA  
GO:0003006 [list] [network] developmental process involved in reproduction  (1475 genes)  IGI  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IBA IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0051980 [list] [network] iron-nicotianamine transmembrane transporter activity  (3 genes)  IBA IGI  
KEGG
Protein NP_001190532.1  NP_001332078.1  NP_001332079.1  NP_001332080.1  NP_001332081.1  NP_200167.2 
BLAST NP_001190532.1  NP_001332078.1  NP_001332079.1  NP_001332080.1  NP_001332081.1  NP_200167.2 
Orthologous [Ortholog page] LOC541800 (zma)  YSL1 (ath)  YSL2 (ath)  LOC4330161 (osa)  LOC4336545 (osa)  LOC4336546 (osa)  LOC7477824 (ppo)  LOC9268232 (osa)  LOC11429596 (mtr)  LOC11437925 (mtr)  LOC25484564 (mtr)  VVYS1 (vvi)  LOC100255514 (vvi)  LOC100259860 (vvi)  LOC100273385 (zma)  LOC100382320 (zma)  LOC100785643 (gma)  LOC100795669 (gma)  LOC100803306 (gma)  LOC100807763 (gma)  LOC100810191 (gma)  LOC100820417 (gma)  LOC101256566 (sly)  LOC101265663 (sly)  LOC103834971 (bra)  LOC103844830 (bra)  LOC103861463 (bra)  LOC103861748 (bra)  LOC103874307 (bra) 
Subcellular
localization
wolf
plas 6,  E.R. 3,  nucl_plas 3,  cysk_plas 3,  mito_plas 3,  cyto_plas 3  (predict for NP_001190532.1)
plas 6,  E.R. 3,  nucl_plas 3,  cysk_plas 3,  mito_plas 3,  cyto_plas 3  (predict for NP_001332078.1)
chlo 3,  extr 3,  plas 2,  nucl 1,  chlo_mito 1  (predict for NP_001332079.1)
plas 6,  E.R. 3,  nucl_plas 3,  cysk_plas 3,  mito_plas 3,  cyto_plas 3  (predict for NP_001332080.1)
plas 6,  E.R. 3,  nucl_plas 3,  cysk_plas 3,  mito_plas 3,  cyto_plas 3  (predict for NP_001332081.1)
plas 6,  E.R. 3,  nucl_plas 3,  cysk_plas 3,  mito_plas 3,  cyto_plas 3  (predict for NP_200167.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001190532.1)
other 9  (predict for NP_001332078.1)
scret 8  (predict for NP_001332079.1)
other 9  (predict for NP_001332080.1)
other 9  (predict for NP_001332081.1)
other 9  (predict for NP_200167.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00910 Nitrogen metabolism 2
Genes directly connected with YSL3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.2 CCH copper chaperone [detail] 824790
5.7 FSD1 Fe superoxide dismutase 1 [detail] 828613
5.6 YSL2 YELLOW STRIPE like 2 [detail] 832509
4.3 ABCG42 ABC-2 and Plant PDR ABC-type transporter family protein [detail] 827188
Coexpressed
gene list		 [Coexpressed gene list for YSL3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248276_at
248276_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248276_at
248276_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248276_at
248276_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835437      
Refseq ID (protein) NP_001190532.1 
NP_001332078.1 
NP_001332079.1 
NP_001332080.1 
NP_001332081.1 
NP_200167.2 


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