[←][→] ath   At5g53800 Gene
functional annotation
Function   nucleic acid-binding protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
KEGG
Protein NP_568799.1 
BLAST NP_568799.1 
Orthologous [Ortholog page] LOC4336481 (osa)  LOC7460828 (ppo)  LOC25487355 (mtr)  LOC100778706 (gma)  LOC100808770 (gma)  LOC101248648 (sly)  LOC103844847 (bra)  LOC123046039 (tae)  LOC123053918 (tae)  LOC123427324 (hvu) 
Subcellular
localization
wolf
nucl 10  (predict for NP_568799.1)
Subcellular
localization
TargetP
other 9  (predict for NP_568799.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G53800 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.2 AT4G08580 microfibrillar-associated protein-like protein [detail] 826419
10.1 AT2G40650 PRP38 family protein [detail] 818660
9.4 AT3G49601 pre-mRNA-splicing factor [detail] 6241216
9.3 AT1G65280 DNAJ heat shock N-terminal domain-containing protein [detail] 842835
9.3 AT4G15030 folate-sensitive fragile site protein [detail] 827162
9.1 NF-YB11 nuclear factor Y, subunit B11 [detail] 817292
9.0 HOS15 WD-40 repeat family protein [detail] 836867
8.7 PRHA pathogenesis related homeodomain protein A [detail] 829117
8.6 AT1G74250 DNAJ heat shock N-terminal domain-containing protein [detail] 843765
8.6 AT5G40340 Tudor/PWWP/MBT superfamily protein [detail] 834032
8.6 AT3G57910 D111/G-patch domain-containing protein [detail] 824960
8.5 AT4G27120 DDRGK domain protein [detail] 828820
8.3 AT2G27285 nuclear speckle splicing regulatory-like protein (DUF2040) [detail] 817271
8.2 PMD1 Tropomyosin-like protein [detail] 825053
8.1 VIP4 leo1-like family protein [detail] 836236
7.7 AT3G13780 SMAD/FHA domain-containing protein [detail] 820588
7.5 AT5G13340 arginine/glutamate-rich 1 protein [detail] 831175
7.3 AT5G53930 transcriptional regulator ATRX-like protein [detail] 835476
7.1 AT5G47660 Homeodomain-like superfamily protein [detail] 834817
6.6 AT5G19960 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 832118
6.1 AT2G25650 DNA-binding storekeeper protein-related transcriptional regulator [detail] 817106
5.7 NF-YC10 nuclear factor Y, subunit C10 [detail] 837313
Coexpressed
gene list		 [Coexpressed gene list for AT5G53800]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248228_at
248228_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248228_at
248228_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248228_at
248228_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835461      
Refseq ID (protein) NP_568799.1 


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