[←][→] ath   At5g53830 Gene
functional annotation
Function   VQ motif-containing protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010087 [list] [network] phloem or xylem histogenesis  (158 genes)  IEA  
GO:0048646 [list] [network] anatomical structure formation involved in morphogenesis  (266 genes)  IEA  
GO:0002376 [list] [network] immune system process  (453 genes)  IEA  
GO:0065008 [list] [network] regulation of biological quality  (480 genes)  IEA  
GO:1901698 [list] [network] response to nitrogen compound  (723 genes)  IEA  
GO:0042742 [list] [network] defense response to bacterium  (980 genes)  IEA  
GO:0009620 [list] [network] response to fungus  (999 genes)  IEA  
GO:0007165 [list] [network] signal transduction  (2054 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_200194.1 
BLAST NP_200194.1 
Orthologous [Ortholog page] AT2G33780 (ath)  AT3G15300 (ath)  AT1G28280 (ath)  AT1G80450 (ath)  LOC4325545 (osa)  LOC4339337 (osa)  LOC7456791 (ppo)  LOC7458434 (ppo)  LOC7460816 (ppo)  LOC7468703 (ppo)  LOC7468704 (ppo)  LOC11430220 (mtr)  LOC11438828 (mtr)  LOC18095574 (ppo)  LOC18103035 (ppo)  LOC25487336 (mtr)  LOC25493144 (mtr)  LOC100305738 (gma)  LOC100526932 (gma)  LOC100776411 (gma)  LOC100783744 (gma)  LOC100785516 (gma)  LOC100797647 (gma)  LOC100802153 (gma)  LOC100802274 (gma)  LOC100818804 (gma)  LOC101247994 (sly)  LOC101250680 (sly)  LOC101254158 (sly)  LOC101257285 (sly)  LOC102662701 (gma)  LOC103829022 (bra)  LOC103830436 (bra)  LOC103832486 (bra)  LOC103835335 (bra)  LOC103840890 (bra)  LOC103844850 (bra)  LOC103852011 (bra)  LOC103853255 (bra)  LOC103869939 (bra)  LOC117133659 (bra)  LOC117133660 (bra)  LOC123061924 (tae)  LOC123070619 (tae)  LOC123079022 (tae)  LOC123140248 (tae)  LOC123176917 (tae)  LOC123182650 (tae)  LOC123416130 (hvu)  LOC123440246 (hvu) 
Subcellular
localization
wolf
nucl 9,  chlo 1,  extr 1  (predict for NP_200194.1)
Subcellular
localization
TargetP
chlo 6,  other 5  (predict for NP_200194.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G53830 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.5 AT5G53820 Late embryogenesis abundant protein (LEA) family protein [detail] 835463
4.6 CLE41 CLAVATA3/ESR-RELATED 41 [detail] 822075
4.3 AT5G48800 Phototropic-responsive NPH3 family protein [detail] 834938
Coexpressed
gene list		 [Coexpressed gene list for AT5G53830]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248230_at
248230_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248230_at
248230_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248230_at
248230_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835464      
Refseq ID (protein) NP_200194.1 


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