[←][→] ath   At5g54080 Gene
functional annotation
Function   homogentisate 1,2-dioxygenase      
GO BP
GO:1902000 [list] [network] homogentisate catabolic process  (3 genes)  IDA  
GO:0006572 [list] [network] tyrosine catabolic process  (4 genes)  IGI  
GO:0006559 [list] [network] L-phenylalanine catabolic process  (5 genes)  IEA  
GO CC
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0004411 [list] [network] homogentisate 1,2-dioxygenase activity  (1 genes)  IDA  
KEGG ath00350 [list] [network] Tyrosine metabolism (41 genes)
Protein NP_200219.1  NP_851187.1 
BLAST NP_200219.1  NP_851187.1 
Orthologous [Ortholog page] LOC543605 (sly)  LOC4339844 (osa)  LOC7485142 (ppo)  LOC25502511 (mtr)  HGO2 (gma)  HGO1 (gma)  LOC103851993 (bra)  LOC123088644 (tae)  LOC123151102 (tae)  LOC123164099 (tae)  LOC123407136 (hvu) 
Subcellular
localization
wolf
cyto 6,  nucl 1,  pero 1,  mito 1,  extr 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_200219.1)
cyto 6,  nucl 1,  pero 1,  mito 1,  extr 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_851187.1)
Subcellular
localization
TargetP
other 9  (predict for NP_200219.1)
other 9  (predict for NP_851187.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 6
ath00350 Tyrosine metabolism 3
ath00310 Lysine degradation 2
ath00640 Propanoate metabolism 2
ath00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
Genes directly connected with HGO on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.0 AT1G07040 plant/protein [detail] 837215
9.6 IVD isovaleryl-CoA-dehydrogenase [detail] 823668
9.5 PDS1 4-hydroxyphenylpyruvate dioxygenase [detail] 837168
8.2 ML2 MEI2-like 2 [detail] 818890
8.0 AT2G40420 Transmembrane amino acid transporter family protein [detail] 818635
6.0 AT1G28260 Telomerase activating protein Est1 [detail] 839720
Coexpressed
gene list		 [Coexpressed gene list for HGO]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248193_at
248193_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248193_at
248193_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248193_at
248193_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835494      
Refseq ID (protein) NP_200219.1 
NP_851187.1 


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