[←][→] ath   At5g54130 Gene
functional annotation
Function   Calcium-binding endonuclease/exonuclease/phosphatase family    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0040008 [list] [network] regulation of growth  (345 genes)  IEA  
GO:0048589 [list] [network] developmental growth  (1060 genes)  IEA  
GO:0030154 [list] [network] cell differentiation  (1176 genes)  IEA  
GO:0050793 [list] [network] regulation of developmental process  (1250 genes)  IEA  
GO CC
GO MF
KEGG
Protein NP_001078754.1  NP_001119432.1  NP_001119433.1 
BLAST NP_001078754.1  NP_001119432.1  NP_001119433.1 
Orthologous [Ortholog page] AT1G02270 (ath)  LOC4348262 (osa)  LOC7486816 (ppo)  LOC7487753 (ppo)  LOC7496452 (ppo)  LOC11410878 (mtr)  LOC11421676 (mtr)  LOC18105480 (ppo)  LOC25500583 (mtr)  LOC100777138 (gma)  LOC100779780 (gma)  LOC100788191 (gma)  LOC100792805 (gma)  LOC100797792 (gma)  LOC101253871 (sly)  LOC103843764 (bra)  LOC103844602 (bra)  LOC103844870 (bra)  LOC103851988 (bra)  LOC123042449 (tae)  LOC123180909 (tae)  LOC123428710 (hvu) 
Subcellular
localization
wolf
chlo 5,  mito 2,  nucl 2,  cyto_mito 1  (predict for NP_001078754.1)
chlo 4,  nucl 4,  mito 1,  cyto_nucl 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001119432.1)
chlo 4,  nucl 4,  mito 1,  cyto_nucl 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001119433.1)
Subcellular
localization
TargetP
other 3  (predict for NP_001078754.1)
other 3  (predict for NP_001119432.1)
other 3  (predict for NP_001119433.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00760 Nicotinate and nicotinamide metabolism 4
ath01240 Biosynthesis of cofactors 3
Genes directly connected with AT5G54130 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.2 AO L-aspartate oxidase [detail] 831328
6.0 AT3G24460 Serinc-domain containing serine and sphingolipid biosynthesis protein [detail] 822036
5.4 bHLH34 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [detail] 821899
4.8 AT2G28200 C2H2-type zinc finger family protein [detail] 817366
4.5 AT4G17350 auxin canalization protein (DUF828) [detail] 827447
Coexpressed
gene list		 [Coexpressed gene list for AT5G54130]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248191_at
248191_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248191_at
248191_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248191_at
248191_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835500      
Refseq ID (protein) NP_001078754.1 
NP_001119432.1 
NP_001119433.1 


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