[←][→] ath   At5g54160 Gene
functional annotation
Function   O-methyltransferase 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0051555 [list] [network] flavonol biosynthetic process  (15 genes)  IDA  
GO:0009809 [list] [network] lignin biosynthetic process  (43 genes)  IMP  
GO CC
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA TAS  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  HDA  
GO MF
GO:0030744 [list] [network] luteolin O-methyltransferase activity  (1 genes)  IDA  
GO:0030755 [list] [network] quercetin 3-O-methyltransferase activity  (1 genes)  IDA  
GO:0033799 [list] [network] myricetin 3'-O-methyltransferase activity  (1 genes)  IDA  
GO:0047763 [list] [network] caffeate O-methyltransferase activity  (2 genes)  IMP ISS  
KEGG ath00380 [list] [network] Tryptophan metabolism (64 genes)
ath00940 [list] [network] Phenylpropanoid biosynthesis (128 genes)
Protein NP_200227.1 
BLAST NP_200227.1 
Orthologous [Ortholog page] LOC542948 (tae)  LOC543449 (tae)  LOC780608 (tae)  LOC4344702 (osa)  LOC7464476 (ppo)  LOC7493466 (ppo)  LOC11421675 (mtr)  LOC11428411 (mtr)  LOC100125743 (tae)  LOC100777636 (gma)  LOC100780100 (gma)  IMT1 (gma)  LOC100806525 (gma)  LOC101251452 (sly)  LOC103844876 (bra)  LOC103844878 (bra)  LOC103851985 (bra)  LOC103857055 (bra)  LOC103861716 (bra)  LOC123063735 (tae)  LOC123081042 (tae)  LOC123129898 (tae)  LOC123147740 (tae)  LOC123164941 (tae)  LOC123402226 (hvu)  LOC123410642 (hvu)  LOC123445736 (hvu) 
Subcellular
localization
wolf
cyto 6,  chlo 1,  cysk 1  (predict for NP_200227.1)
Subcellular
localization
TargetP
other 8  (predict for NP_200227.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 16
ath00941 Flavonoid biosynthesis 4
ath00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
ath00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
ath00360 Phenylalanine metabolism 3
Genes directly connected with OMT1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
12.7 CCoAOMT1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 829551
11.6 4CL1 4-coumarate:CoA ligase 1 [detail] 841593
10.0 CYP98A3 cytochrome P450, family 98, subfamily A, polypeptide 3 [detail] 818686
6.3 FAH1 ferulic acid 5-hydroxylase 1 [detail] 829779
6.3 CCR1 cinnamoyl coa reductase 1 [detail] 838165
Coexpressed
gene list		 [Coexpressed gene list for OMT1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248200_at
248200_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248200_at
248200_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248200_at
248200_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835504      
Refseq ID (protein) NP_200227.1 


The preparation time of this page was 0.1 [sec].