[←][→] ath   At5g54180 Gene
functional annotation
Function   plastid transcriptionally active 15    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006393 [list] [network] termination of mitochondrial transcription  (1 genes)  IDA  
GO:0015979 [list] [network] photosynthesis  (167 genes)  IDA  
GO CC
GO:0042644 [list] [network] chloroplast nucleoid  (43 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA  
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (789 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG
Protein NP_200229.1 
BLAST NP_200229.1 
Orthologous [Ortholog page] LOC7475142 (ppo)  LOC11421673 (mtr)  LOC100799904 (gma)  LOC101249713 (sly)  LOC103844880 (bra) 
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for NP_200229.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_200229.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PTAC15 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.1 AT5G46580 pentatricopeptide (PPR) repeat-containing protein [detail] 834701
6.9 OTP81 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 817526
6.8 EMB2768 Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial [detail] 821282
Coexpressed
gene list		 [Coexpressed gene list for PTAC15]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248201_at
248201_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248201_at
248201_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248201_at
248201_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835506      
Refseq ID (protein) NP_200229.1 


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