[←][→] ath   At5g54260 Gene
functional annotation
Function   DNA repair and meiosis protein (Mre11)      
GO BP
GO CC
GO:0000795 [list] [network] synaptonemal complex  (4 genes)  IDA  
GO:0000791 [list] [network] euchromatin  (11 genes)  IDA  
GO:0000785 [list] [network] chromatin  (135 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0008296 [list] [network] 3'-5'-exodeoxyribonuclease activity  (3 genes)  IEA  
GO:0004520 [list] [network] endodeoxyribonuclease activity  (19 genes)  IEA  
GO:0030145 [list] [network] manganese ion binding  (44 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath03440 [list] [network] Homologous recombination (60 genes)
ath03450 [list] [network] Non-homologous end-joining (8 genes)
Protein NP_001330550.1  NP_200237.1 
BLAST NP_001330550.1  NP_200237.1 
Orthologous [Ortholog page] LOC4337137 (osa)  LOC11436847 (mtr)  LOC18095655 (ppo)  LOC100801335 (gma)  LOC101264663 (sly)  LOC103844885 (bra)  LOC123047225 (tae)  LOC123055023 (tae)  LOC123190879 (tae)  LOC123428238 (hvu) 
Subcellular
localization
wolf
nucl 8,  chlo 1,  cyto 1,  cysk 1  (predict for NP_001330550.1)
nucl 9,  chlo 1,  cyto 1  (predict for NP_200237.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001330550.1)
other 9  (predict for NP_200237.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
ath03450 Non-homologous end-joining 2
Genes directly connected with MRE11 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.0 AT2G25420 transducin family protein / WD-40 repeat family protein [detail] 817080
4.7 AT1G03960 Calcium-binding EF hand family protein [detail] 839361
4.7 PRP40B pre-mRNA-processing protein 40B [detail] 821504
Coexpressed
gene list		 [Coexpressed gene list for MRE11]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248152_at
248152_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248152_at
248152_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248152_at
248152_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835514      
Refseq ID (protein) NP_001330550.1 
NP_200237.1 


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