[←][→] ath   AT5G54470 Gene
functional annotation
Function   B-box type zinc finger family protein  
GO BP
GO:0071456 [list] [network] cellular response to hypoxia  (238 genes)  HEP  
GO:0009555 [list] [network] pollen development  (337 genes)  IMP  
GO:0009409 [list] [network] response to cold  (411 genes)  IEP  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_200258.2 
BLAST NP_200258.2 
Orthologous [Ortholog page] BBX28 (ath)  LOC4344813 (osa)  LOC7460864 (ppo)  LOC11417549 (mtr)  LOC100246896 (vvi)  LOC100252747 (vvi)  LOC100264749 (vvi)  LOC100306080 (gma)  LOC100383388 (zma)  LOC100782655 (gma)  LOC100789532 (gma)  LOC100801024 (gma)  LOC100805832 (gma)  LOC100809520 (gma)  LOC100818267 (gma)  LOC100854750 (vvi)  LOC101055534 (sly)  LOC101246984 (sly)  LOC101265452 (sly)  LOC102660179 (gma)  LOC103834812 (bra)  LOC103844901 (bra)  LOC103851960 (bra)  LOC103861686 (bra)  LOC103867022 (bra)  LOC104649503 (sly)  LOC109943107 (zma) 
Subcellular
localization
wolf
chlo 5,  nucl 5  (predict for NP_200258.2)
Subcellular
localization
TargetP
other 8  (predict for NP_200258.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 2
Genes directly connected with BBX29 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.8 PRR9 pseudo-response regulator 9 [detail] 819292
9.4 BBX28 B-box type zinc finger family protein [detail] 828839
7.7 BBX30 B-box type zinc finger family protein [detail] 3769879
7.6 DREB1A dehydration response element B1A [detail] 828652
5.9 AT5G67140 F-box/RNI-like superfamily protein [detail] 836849
4.9 AT3G60520 zinc ion-binding protein [detail] 825223
Coexpressed
gene list		 [Coexpressed gene list for BBX29]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248160_at
248160_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248160_at
248160_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248160_at
248160_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835535      
Refseq ID (protein) NP_200258.2 


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