[←][→] ath   At5g54520 Gene
functional annotation
Function   Transducin/WD40 repeat-like superfamily protein      
GO BP
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (121 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
KEGG
Protein NP_200263.2 
BLAST NP_200263.2 
Orthologous [Ortholog page] LOC4329163 (osa)  LOC18095865 (ppo)  LOC25502675 (mtr)  LOC100790592 (gma)  LOC100800836 (gma)  LOC100816290 (gma)  LOC101260632 (sly)  LOC103857038 (bra)  LOC123043370 (tae)  LOC123051227 (tae)  LOC123187190 (tae)  LOC123424541 (hvu) 
Subcellular
localization
wolf
nucl 8,  chlo 1,  cyto 1,  cysk 1  (predict for NP_200263.2)
Subcellular
localization
TargetP
other 9  (predict for NP_200263.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G54520 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.3 SETH2 UDP-Glycosyltransferase superfamily protein [detail] 823646
7.3 AT3G06210 ARM repeat superfamily protein [detail] 819795
7.1 KDTA KDO transferase A [detail] 831727
6.5 AT1G05860 INO80 complex subunit D-like protein [detail] 837096
6.2 AT4G37480 Chaperone DnaJ-domain superfamily protein [detail] 829903
5.8 AT5G35753 DnaJ heat shock amino-terminal domain protein (DUF3444) [detail] 833553
5.5 AT2G31600 INO80 complex subunit D-like protein [detail] 817718
5.2 AT3G60040 F-box family protein [detail] 825174
4.8 AT3G22430 RNA recognition motif XS domain protein [detail] 821813
Coexpressed
gene list		 [Coexpressed gene list for AT5G54520]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248166_at
248166_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248166_at
248166_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248166_at
248166_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835540      
Refseq ID (protein) NP_200263.2 


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