[←][→] ath   AT5G54780 Gene
functional annotation
Function   Ypt/Rab-GAP domain of gyp1p superfamily protein  
GO BP
GO:0090630 [list] [network] activation of GTPase activity  (13 genes)  IBA  
GO:0006886 [list] [network] intracellular protein transport  (516 genes)  IBA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO MF
GO:0017137 [list] [network] Rab GTPase binding  (35 genes)  IBA  
GO:0005096 [list] [network] GTPase activator activity  (59 genes)  IBA  
KEGG
Protein NP_200289.2 
BLAST NP_200289.2 
Orthologous [Ortholog page] AT4G27100 (ath)  LOC4343429 (osa)  LOC4350806 (osa)  LOC7470936 (ppo)  LOC11415615 (mtr)  LOC11443375 (mtr)  LOC100250247 (vvi)  LOC100281478 (zma)  LOC100281686 (zma)  LOC100282248 (zma)  LOC100782079 (gma)  LOC100790955 (gma)  LOC100805808 (gma)  LOC100810054 (gma)  LOC101254845 (sly)  LOC101256308 (sly)  LOC101261487 (sly)  LOC103851940 (bra)  LOC103857028 (bra)  LOC103866839 (bra) 
Subcellular
localization
wolf
cyto 5,  nucl 3,  mito 1,  cysk 1,  golg 1  (predict for NP_200289.2)
Subcellular
localization
TargetP
other 8  (predict for NP_200289.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G54780 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.4 AT2G21520 Sec14p-like phosphatidylinositol transfer family protein [detail] 816691
5.4 SIP1 SOS3-interacting protein 1 [detail] 835951
5.0 AT4G25900 Galactose mutarotase-like superfamily protein [detail] 828696
4.4 AT2G37980 O-fucosyltransferase family protein [detail] 818376
4.3 AT5G01610 hypothetical protein (Protein of unknown function, DUF538) [detail] 831718
Coexpressed
gene list		 [Coexpressed gene list for AT5G54780]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248129_at
248129_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248129_at
248129_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248129_at
248129_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835568      
Refseq ID (protein) NP_200289.2 


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