[←][→] ath   At5g54930 Gene
functional annotation
Function   AT hook motif-containing protein      
GO BP
GO:2000028 [list] [network] regulation of photoperiodism, flowering  (94 genes)  IMP  
GO:0044238 [list] [network] primary metabolic process  (6291 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
KEGG
Protein NP_001032075.1  NP_568817.1 
BLAST NP_001032075.1  NP_568817.1 
Orthologous [Ortholog page] AT5G52890 (ath)  AT4G21895 (ath)  LOC7470954 (ppo)  LOC7479062 (ppo)  LOC11428253 (mtr)  LOC11444180 (mtr)  LOC18095973 (ppo)  LOC18111266 (ppo)  LOC100783413 (gma)  LOC100789400 (gma)  LOC100801020 (gma)  LOC100817103 (gma)  LOC101249564 (sly)  LOC101258199 (sly)  LOC101259217 (sly)  LOC103834228 (bra)  LOC103844770 (bra)  LOC103844943 (bra)  LOC103852069 (bra)  LOC103857018 (bra)  LOC103859566 (bra)  LOC103859584 (bra)  LOC103861256 (bra)  LOC104646186 (sly)  LOC112326297 (ppo) 
Subcellular
localization
wolf
nucl 9,  chlo 1,  plas 1  (predict for NP_001032075.1)
nucl 9,  chlo 1,  plas 1  (predict for NP_568817.1)
Subcellular
localization
TargetP
other 7,  chlo 5  (predict for NP_001032075.1)
other 7,  chlo 5  (predict for NP_568817.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 2
Genes directly connected with AT5G54930 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.7 BBX8 B-box type zinc finger protein with CCT domain-containing protein [detail] 834878
6.4 AT2G16365 F-box family protein [detail] 816133
6.1 AT1G17665 CA-responsive protein [detail] 838343
6.0 AT4G33985 membrane insertase, putative (DUF1685) [detail] 829545
4.6 AT4G22770 AT hook motif DNA-binding family protein [detail] 828376
Coexpressed
gene list		 [Coexpressed gene list for AT5G54930]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248148_at
248148_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248148_at
248148_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248148_at
248148_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835584      
Refseq ID (protein) NP_001032075.1 
NP_568817.1 


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