[←][→] ath   At5g54940 Gene
functional annotation
Function   Translation initiation factor SUI1 family protein      
GO BP
GO:0071456 [list] [network] cellular response to hypoxia  (241 genes)  HEP  
GO:0009408 [list] [network] response to heat  (287 genes)  IEA  
GO:0097305 [list] [network] response to alcohol  (1209 genes)  IEA  
GO:0098542 [list] [network] defense response to other organism  (2060 genes)  IEA  
GO CC
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO MF
KEGG
Protein NP_001332503.1  NP_568818.1  NP_851192.1 
BLAST NP_001332503.1  NP_568818.1  NP_851192.1 
Orthologous [Ortholog page] AT4G27130 (ath)  AT5G54760 (ath)  AT1G54290 (ath)  LOC4339216 (osa)  LOC4343445 (osa)  LOC7454418 (ppo)  LOC7468126 (ppo)  LOC7486037 (ppo)  LOC7486038 (ppo)  LOC11416614 (mtr)  LOC11428259 (mtr)  LOC11436635 (mtr)  LOC25492108 (mtr)  LOC100306129 (gma)  LOC100499676 (gma)  LOC100499833 (gma)  LOC100499886 (gma)  LOC100682465 (tae)  LOC100784390 (gma)  LOC100788156 (gma)  LOC100791423 (gma)  LOC100791863 (gma)  LOC101247541 (sly)  LOC101247963 (sly)  LOC101257046 (sly)  LOC101257488 (sly)  LOC103832618 (bra)  LOC103832754 (bra)  LOC103834817 (bra)  LOC103844945 (bra)  LOC103857017 (bra)  LOC103861677 (bra)  LOC103866870 (bra)  LOC123052520 (tae)  LOC123061213 (tae)  LOC123071054 (tae)  LOC123079424 (tae)  LOC123138361 (tae)  LOC123182496 (tae)  LOC123188402 (tae)  LOC123425842 (hvu)  LOC123443594 (hvu)  LOC123444606 (hvu) 
Subcellular
localization
wolf
cyto 4,  nucl 3,  extr 2,  mito 1,  cysk 1  (predict for NP_001332503.1)
cyto 4,  nucl 3,  extr 2,  mito 1,  cysk 1  (predict for NP_568818.1)
cyto 4,  nucl 3,  extr 2,  mito 1,  cysk 1  (predict for NP_851192.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001332503.1)
other 8  (predict for NP_568818.1)
other 8  (predict for NP_851192.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT5G54940 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.5 ERD15 dehydration-induced protein (ERD15) [detail] 818741
5.3 HSFA7A heat shock transcription factor A7A [detail] 824354
5.2 AT5G63370 Protein kinase superfamily protein [detail] 836456
Coexpressed
gene list		 [Coexpressed gene list for AT5G54940]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248146_at
248146_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248146_at
248146_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248146_at
248146_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835585      
Refseq ID (protein) NP_001332503.1 
NP_568818.1 
NP_851192.1 


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