[←][→] ath   At5g54970 Gene
functional annotation
Function   uncharacterized protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010035 [list] [network] response to inorganic substance  (2100 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_200308.1 
BLAST NP_200308.1 
Orthologous [Ortholog page] AT4G26960 (ath)  LOC7473626 (ppo)  LOC11417537 (mtr)  LOC102660405 (gma)  LOC102662688 (gma)  LOC103834827 (bra)  LOC103857016 (bra)  LOC107277712 (osa)  LOC107278639 (osa)  LOC123133904 (tae)  LOC123141286 (tae)  LOC123149040 (tae)  LOC123162947 (tae)  LOC123163656 (tae)  LOC123402172 (hvu)  LOC123412120 (hvu) 
Subcellular
localization
wolf
nucl 4,  cyto_nucl 4,  nucl_plas 3,  cyto 2,  mito 2  (predict for NP_200308.1)
Subcellular
localization
TargetP
mito 5  (predict for NP_200308.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 8
ath03420 Nucleotide excision repair 5
ath03430 Mismatch repair 5
ath03440 Homologous recombination 4
ath03410 Base excision repair 2
Genes directly connected with AT5G54970 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
12.0 RPA70D Replication factor-A protein 1-like protein [detail] 836221
11.9 DUT1 DUTP-PYROPHOSPHATASE-LIKE 1 [detail] 823847
11.7 POLA3 DNA primase POLA3 [detail] 834193
8.3 AT1G66620 Protein with RING/U-box and TRAF-like domain [detail] 842980
6.9 RPA32B Replication protein A, subunit RPA32 [detail] 821187
Coexpressed
gene list		 [Coexpressed gene list for AT5G54970]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248139_at
248139_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248139_at
248139_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248139_at
248139_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835588      
Refseq ID (protein) NP_200308.1 


The preparation time of this page was 0.1 [sec].