[←][→] ath   At5g55000 Gene
functional annotation
Function   potassium channel tetramerization domain-containing protein / pentapeptide repeat-containing protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0051260 [list] [network] protein homooligomerization  (28 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (434 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_200311.1  NP_851193.1 
BLAST NP_200311.1  NP_851193.1 
Orthologous [Ortholog page] LOC4331675 (osa)  LOC7482371 (ppo)  LOC7491057 (ppo)  LOC9270558 (osa)  LOC25495839 (mtr)  LOC100806501 (gma)  LOC101252446 (sly)  LOC103857013 (bra)  LOC112323300 (ppo)  LOC123084886 (tae)  LOC123093201 (tae)  LOC123098464 (tae)  LOC123449483 (hvu) 
Subcellular
localization
wolf
cyto 4,  chlo 3,  mito 1,  pero 1  (predict for NP_200311.1)
chlo 4,  cyto 1,  cyto_nucl 1,  mito 1,  pero 1,  nucl 1,  mito_plas 1  (predict for NP_851193.1)
Subcellular
localization
TargetP
other 7  (predict for NP_200311.1)
other 7  (predict for NP_851193.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
ath04712 Circadian rhythm - plant 3
ath03015 mRNA surveillance pathway 2
Genes directly connected with FIP2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.5 ARFB1C ADP-ribosylation factor B1C [detail] 821079
5.6 AT3G12760 defective in cullin neddylation protein [detail] 820458
5.3 ATMAK3 Acyl-CoA N-acyltransferases (NAT) superfamily protein [detail] 818391
Coexpressed
gene list		 [Coexpressed gene list for FIP2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248117_at
248117_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248117_at
248117_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248117_at
248117_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835591      
Refseq ID (protein) NP_200311.1 
NP_851193.1 


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