[][] ath   AT5G55100 Gene
functional annotation
Function   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001331565.1  NP_001331566.1  NP_001331567.1  NP_001331568.1  NP_001331569.1  NP_001331570.1  NP_001331571.1  NP_001331572.1  NP_001331573.1  NP_001331574.1  NP_568820.1  NP_851194.1 
BLAST NP_001331565.1  NP_001331566.1  NP_001331567.1  NP_001331568.1  NP_001331569.1  NP_001331570.1  NP_001331571.1  NP_001331572.1  NP_001331573.1  NP_001331574.1  NP_568820.1  NP_851194.1 
Orthologous [Ortholog page] LOC4325296 (osa)LOC11425876 (mtr)LOC100250252 (vvi)LOC100383427 (zma)LOC100791165 (gma)LOC100801276 (gma)LOC101250744 (sly)LOC103851906 (bra)
Subcellular
localization
wolf
nucl 10  (predict for NP_001331565.1)
nucl 10  (predict for NP_001331566.1)
nucl 10  (predict for NP_001331567.1)
nucl 10  (predict for NP_001331568.1)
nucl 10  (predict for NP_001331569.1)
nucl 10  (predict for NP_001331570.1)
nucl 10  (predict for NP_001331571.1)
nucl 10  (predict for NP_001331572.1)
nucl 10  (predict for NP_001331573.1)
nucl 10  (predict for NP_001331574.1)
nucl 10  (predict for NP_568820.1)
nucl 10  (predict for NP_851194.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001331565.1)
other 8  (predict for NP_001331566.1)
other 8  (predict for NP_001331567.1)
other 8  (predict for NP_001331568.1)
other 8  (predict for NP_001331569.1)
other 8  (predict for NP_001331570.1)
other 8  (predict for NP_001331571.1)
other 8  (predict for NP_001331572.1)
other 8  (predict for NP_001331573.1)
other 8  (predict for NP_001331574.1)
other 6  (predict for NP_568820.1)
other 6  (predict for NP_851194.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G55100 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
8.8 AT2G01100 FAM133-like protein [detail] 814639
7.8 AT1G10890 arginine/glutamate-rich 1 protein [detail] 837632
6.8 AT2G17975 zinc finger (Ran-binding) family protein [detail] 816309
6.5 AT1G55590 RNI-like superfamily protein [detail] 842008
6.4 AT2G37840 Protein kinase superfamily protein [detail] 818361
6.3 AT3G52030 F-box family protein with WD40/YVTN repeat doamin [detail] 824366
6.2 SPHK1 sphingosine kinase 1 [detail] 828239
5.7 AT3G49060 U-box domain-containing protein kinase family protein [detail] 824068
5.5 FRS1 FAR1-related sequence 1 [detail] 827744
4.5 AT4G13040 Integrase-type DNA-binding superfamily protein [detail] 826918
Coexpressed
gene list
[Coexpressed gene list for AT5G55100]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248106_at
248106_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248106_at
248106_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
248106_at
248106_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 835601    
Refseq ID (protein) NP_001331565.1 
NP_001331566.1 
NP_001331567.1 
NP_001331568.1 
NP_001331569.1 
NP_001331570.1 
NP_001331571.1 
NP_001331572.1 
NP_001331573.1 
NP_001331574.1 
NP_568820.1 
NP_851194.1 


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