[←][→] ath   At5g55100 Gene
functional annotation
Function   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein      
GO BP
GO:0006396 [list] [network] RNA processing  (567 genes)  IEA  
GO:0042742 [list] [network] defense response to bacterium  (980 genes)  IEA  
GO:0043412 [list] [network] macromolecule modification  (1856 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1729 genes)  IEA  
KEGG
Protein NP_001331565.1  NP_001331566.1  NP_001331567.1  NP_001331568.1  NP_001331569.1  NP_001331570.1  NP_001331571.1  NP_001331572.1  NP_001331573.1  NP_001331574.1  NP_568820.1  NP_851194.1 
BLAST NP_001331565.1  NP_001331566.1  NP_001331567.1  NP_001331568.1  NP_001331569.1  NP_001331570.1  NP_001331571.1  NP_001331572.1  NP_001331573.1  NP_001331574.1  NP_568820.1  NP_851194.1 
Orthologous [Ortholog page] LOC4325296 (osa)  LOC7478709 (ppo)  LOC11425876 (mtr)  LOC100791165 (gma)  LOC100801276 (gma)  LOC101250744 (sly)  LOC103851906 (bra)  LOC123061788 (tae)  LOC123070467 (tae)  LOC123078888 (tae)  LOC123444207 (hvu) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001331565.1)
nucl 10  (predict for NP_001331566.1)
nucl 10  (predict for NP_001331567.1)
nucl 10  (predict for NP_001331568.1)
nucl 10  (predict for NP_001331569.1)
nucl 10  (predict for NP_001331570.1)
nucl 10  (predict for NP_001331571.1)
nucl 10  (predict for NP_001331572.1)
nucl 10  (predict for NP_001331573.1)
nucl 10  (predict for NP_001331574.1)
nucl 10  (predict for NP_568820.1)
nucl 10  (predict for NP_851194.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001331565.1)
other 8  (predict for NP_001331566.1)
other 8  (predict for NP_001331567.1)
other 8  (predict for NP_001331568.1)
other 8  (predict for NP_001331569.1)
other 8  (predict for NP_001331570.1)
other 8  (predict for NP_001331571.1)
other 8  (predict for NP_001331572.1)
other 8  (predict for NP_001331573.1)
other 8  (predict for NP_001331574.1)
other 6  (predict for NP_568820.1)
other 6  (predict for NP_851194.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT5G55100 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.1 AT2G01100 FAM133-like protein [detail] 814639
7.3 CPK23 calcium-dependent protein kinase 23 [detail] 825809
7.1 AT1G04300 TRAF-like superfamily protein [detail] 839551
6.1 AT2G37840 Protein kinase superfamily protein [detail] 818361
5.6 AT3G49060 U-box domain-containing protein kinase family protein [detail] 824068
Coexpressed
gene list		 [Coexpressed gene list for AT5G55100]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248106_at
248106_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248106_at
248106_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248106_at
248106_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835601      
Refseq ID (protein) NP_001331565.1 
NP_001331566.1 
NP_001331567.1 
NP_001331568.1 
NP_001331569.1 
NP_001331570.1 
NP_001331571.1 
NP_001331572.1 
NP_001331573.1 
NP_001331574.1 
NP_568820.1 
NP_851194.1 


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