[←][→] ath   AT5G55120 Gene
functional annotation
Function   GDP-L-galactose phosphorylase VITAMIN C DEFECTIVE 5 (VTC5)  
GO BP
GO:0019853 [list] [network] L-ascorbic acid biosynthetic process  (21 genes)  IMP  
GO:0010193 [list] [network] response to ozone  (36 genes)  IEP  
GO:0006006 [list] [network] glucose metabolic process  (42 genes)  IBA  
GO:0009753 [list] [network] response to jasmonic acid  (222 genes)  IEP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0010475 [list] [network] galactose-1-phosphate guanylyltransferase (GDP) activity  (2 genes)  IDA  
GO:0080047 [list] [network] GDP-L-galactose phosphorylase activity  (2 genes)  IEA  
GO:0080048 [list] [network] GDP-D-glucose phosphorylase activity  (2 genes)  IBA IDA  
GO:0080046 [list] [network] quercetin 4'-O-glucosyltransferase activity  (8 genes)  IDA  
GO:0005085 [list] [network] guanyl-nucleotide exchange factor activity  (41 genes)  IEA  
GO:0000166 [list] [network] nucleotide binding  (2618 genes)  IEA  
GO:0016787 [list] [network] hydrolase activity  (3024 genes)  IEA  
KEGG ath00053 [list] [network] Ascorbate and aldarate metabolism (53 genes)
Protein NP_200323.1 
BLAST NP_200323.1 
Orthologous [Ortholog page] VTC2 (ath)  LOC4351698 (osa)  LOC7470803 (ppo)  LOC11423375 (mtr)  LOC25488979 (mtr)  LOC100253859 (vvi)  LOC100262099 (vvi)  LOC100283852 (zma)  LOC100785588 (gma)  LOC100800738 (gma)  LOC100806541 (gma)  GGP1 (sly)  GGP2 (sly)  LOC103834830 (bra)  LOC103851903 (bra)  LOC103861660 (bra)  VTC2 (bra) 
Subcellular
localization
wolf
chlo 4,  nucl 3,  mito 1,  nucl_plas 1  (predict for NP_200323.1)
Subcellular
localization
TargetP
other 7  (predict for NP_200323.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00966 Glucosinolate biosynthesis 7
ath00380 Tryptophan metabolism 6
ath01210 2-Oxocarboxylic acid metabolism 6
ath00920 Sulfur metabolism 3
ath00230 Purine metabolism 2
Genes directly connected with VTC5 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.3 AKN2 APS-kinase 2 [detail] 830153
6.2 UGT74B1 UDP-glucosyl transferase 74B1 [detail] 839022
5.9 CYP79B3 cytochrome P450, family 79, subfamily B, polypeptide 3 [detail] 816765
4.9 AT3G02510 Regulator of chromosome condensation (RCC1) family protein [detail] 821100
Coexpressed
gene list		 [Coexpressed gene list for VTC5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248091_at
248091_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248091_at
248091_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248091_at
248091_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835603      
Refseq ID (protein) NP_200323.1 


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