[←][→] ath   At5g55120 Gene
functional annotation
Function   GDP-L-galactose phosphorylase VITAMIN C DEFECTIVE 5 (VTC5)    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0019853 [list] [network] L-ascorbic acid biosynthetic process  (18 genes)  IMP  
GO:0010193 [list] [network] response to ozone  (36 genes)  IEP  
GO:0009753 [list] [network] response to jasmonic acid  (611 genes)  IEP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0080048 [list] [network] GDP-D-glucose phosphorylase activity  (2 genes)  IDA  
GO:0080046 [list] [network] quercetin 4'-O-glucosyltransferase activity  (8 genes)  IDA  
KEGG ath00053 [list] [network] Ascorbate and aldarate metabolism (63 genes)
ath01240 [list] [network] Biosynthesis of cofactors (236 genes)
Protein NP_200323.1 
BLAST NP_200323.1 
Orthologous [Ortholog page] VTC2 (ath)  LOC4351698 (osa)  LOC7470803 (ppo)  LOC7483618 (ppo)  LOC11423375 (mtr)  LOC18099376 (ppo)  LOC25488979 (mtr)  LOC100785588 (gma)  LOC100800738 (gma)  LOC100806541 (gma)  GGP1 (sly)  GGP2 (sly)  LOC103834830 (bra)  LOC103851903 (bra)  LOC103861660 (bra)  VTC2 (bra)  LOC123086534 (tae)  LOC123091368 (tae)  LOC123096339 (tae)  LOC123102767 (tae)  LOC123110933 (tae)  LOC123120007 (tae)  LOC123447890 (hvu)  LOC123453136 (hvu) 
Subcellular
localization
wolf
chlo 4,  nucl 3,  mito 1,  nucl_plas 1  (predict for NP_200323.1)
Subcellular
localization
TargetP
other 7  (predict for NP_200323.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00966 Glucosinolate biosynthesis 7
ath00380 Tryptophan metabolism 6
ath01210 2-Oxocarboxylic acid metabolism 6
ath00230 Purine metabolism 2
ath00920 Sulfur metabolism 2
Genes directly connected with VTC5 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.4 AKN2 APS-kinase 2 [detail] 830153
7.3 UGT74B1 UDP-glucosyl transferase 74B1 [detail] 839022
6.6 SOT16 sulfotransferase 16 [detail] 843750
5.3 AT5G14700 NAD(P)-binding Rossmann-fold superfamily protein [detail] 831322
Coexpressed
gene list		 [Coexpressed gene list for VTC5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248091_at
248091_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248091_at
248091_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248091_at
248091_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835603      
Refseq ID (protein) NP_200323.1 


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