ATTED-II : GeneID search result

[←][→] ath AT5G55940 Gene

functional annotation

Function

Uncharacterized protein family (UPF0172)

GO BP

GO:0009793 [list] [network] embryo development ending in seed dormancy

(547 genes)

NAS

GO CC

GO:0072546 [list] [network] ER membrane protein complex	(9 genes)	IBA
GO:0005783 [list] [network] endoplasmic reticulum	(877 genes)	IDA
GO:0009536 [list] [network] plastid	(5519 genes)	HDA

GO MF

KEGG

Protein

NP_568832.1

BLAST

NP_568832.1

Orthologous

[Ortholog page] LOC4335339 (osa) LOC11433699 (mtr) LOC100242919 (vvi) LOC100276147 (zma) LOC100306212 (gma) LOC100527135 (gma) LOC101244326 (sly) LOC101268196 (sly) LOC103845030 (bra) LOC103851854 (bra) LOC103856959 (bra)

Subcellular
localization
wolf

cyto 4, nucl 1, mito 1, extr 1, chlo 1, cysk 1, golg 1, cyto_mito 1, nucl_plas 1, mito_plas 1

(predict for NP_568832.1)

Subcellular
localization
TargetP

other 7, mito 4

(predict for NP_568832.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03050	Proteasome	3
ath03040	Spliceosome	2

Genes directly connected with emb2731 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.6	PAE2	20S proteasome alpha subunit E2	[detail]	820649
5.6	MBD6	methyl-CPG-binding domain 6	[detail]	836057
5.4	AT5G07960	asterix-like protein	[detail]	830690

Coexpressed
gene list

[Coexpressed gene list for emb2731]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

248041_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

248041_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

248041_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	835692
Refseq ID (protein)	NP_568832.1

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