[←][→] ath   AT5G56130 Gene
functional annotation
Function   Transducin/WD40 repeat-like superfamily protein  
GO BP
GO:0010267 [list] [network] production of ta-siRNAs involved in RNA interference  (15 genes)  IMP  
GO:0006406 [list] [network] mRNA export from nucleus  (30 genes)  IBA  
GO:0031047 [list] [network] gene silencing by RNA  (183 genes)  IMP  
GO:0008380 [list] [network] RNA splicing  (272 genes)  IEA  
GO:0006397 [list] [network] mRNA processing  (376 genes)  IEA  
GO CC
GO:0000445 [list] [network] THO complex part of transcription export complex  (4 genes)  IBA  
GO:0000347 [list] [network] THO complex  (11 genes)  IDA  
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (130 genes)  ISS  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
KEGG ath03013 [list] [network] RNA transport (171 genes)
ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_200424.1 
BLAST NP_200424.1 
Orthologous [Ortholog page] LOC4346657 (osa)  LOC7457665 (ppo)  LOC11438034 (mtr)  LOC100241262 (vvi)  LOC100272607 (zma)  LOC100782507 (gma)  LOC100812126 (gma)  LOC101265940 (sly)  LOC103845047 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_200424.1)
Subcellular
localization
TargetP
other 8  (predict for NP_200424.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 3
Genes directly connected with TEX1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.8 AT3G07170 Sterile alpha motif (SAM) domain-containing protein [detail] 819904
6.1 AT5G63440 hypothetical protein (DUF167) [detail] 836463
5.8 AT4G39150 DNAJ heat shock N-terminal domain-containing protein [detail] 830070
5.7 HGPT Hypoxanthine-guanine phosphoribosyltransferase [detail] 843505
Coexpressed
gene list		 [Coexpressed gene list for TEX1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247993_at
247993_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247993_at
247993_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247993_at
247993_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835712      
Refseq ID (protein) NP_200424.1 


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