[←][→] ath   At5g56140 Gene
functional annotation
Function   RNA-binding KH domain-containing protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009751 [list] [network] response to salicylic acid  (438 genes)  IEP  
GO:0009737 [list] [network] response to abscisic acid  (1086 genes)  IEP  
GO CC
GO:0005886 [list] [network] plasma membrane  (2529 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA  
GO MF
KEGG
Protein NP_200425.1 
BLAST NP_200425.1 
Orthologous [Ortholog page] AT4G26480 (ath)  LOC4330567 (osa)  LOC7471710 (ppo)  LOC11422411 (mtr)  LOC18103562 (ppo)  LOC100789866 (gma)  LOC100790630 (gma)  LOC101265255 (sly)  LOC103845049 (bra)  LOC103856952 (bra)  LOC103861632 (bra)  LOC103866225 (bra)  LOC123128237 (tae)  LOC123138071 (tae)  LOC123145335 (tae)  LOC123401377 (hvu) 
Subcellular
localization
wolf
nucl 5,  chlo 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_200425.1)
Subcellular
localization
TargetP
other 8  (predict for NP_200425.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 3
Genes directly connected with AT5G56140 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.4 AT4G26480 RNA-binding KH domain-containing protein [detail] 828754
5.7 GLX2-1 glyoxalase 2-1 [detail] 818944
5.5 VAMP714 vesicle-associated membrane protein 714 [detail] 832297
5.1 AT3G15260 Protein phosphatase 2C family protein [detail] 820757
Coexpressed
gene list		 [Coexpressed gene list for AT5G56140]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247994_at
247994_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247994_at
247994_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247994_at
247994_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835713      
Refseq ID (protein) NP_200425.1 


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